RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ORC6Q9Y5N6 252 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 DGKBQ9Y6T7 804 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 PDPK1O15530 556 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 ERI3O43414 337 aaKnown RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 F3P13726 295 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 SLC19A1P41440 591 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 PRIM2P49643 509 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 MANFP55145 182 aaKnown RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 TEAD4Q15561 434 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 TMEM35AQ53FP2 167 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 RBM48Q5RL73 367 aaKnown RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 GCNT6Q5T4J0 391 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 TRIM40Q6P9F5 258 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 SHQ1Q6PI26 577 aaKnown RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 TMEM26Q6ZUK4 368 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 FRMD1Q8N878 549 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 ASPSCR1Q9BZE9 553 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 TIMMDC1Q9NPL8 285 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 SLAMF7Q9NQ25 335 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 CDC14AQ9UNH5 594 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 PCDHGA8Q9Y5G5 932 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 A0A0A6YYD5 115 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 PRAMEF26H0Y7S4 382 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 ZNF701M0R085 212 aaPredicted RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 BTN3A3O00478 584 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 TNFRSF21O75509 655 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 FABP3P05413 133 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 IL7RP16871 459 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 ILF3Q12906 894 aaKnown RBP eCLIP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 BIRC2Q13490 618 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 PUS10Q3MIT2 529 aaKnown RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 ZNF793Q6ZN11 406 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 SLC22A18ASQ8N1D0 253 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 C12orf43Q96C57 262 aaKnown RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 CXorf36Q9H7Y0 433 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 C2orf42Q9NWW7 574 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 TRNAU1APQ9NX07 287 aaKnown RBP17.68■□□□□ 0.42
HOXA9-201ENST00000343483 BAG5Q9UL15 447 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 HS3ST3A1Q9Y663 406 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 AP1M2Q9Y6Q5 423 aa17.68■□□□□ 0.42
HOXA9-201ENST00000343483 LOC100130705A0A1B0GUX0 176 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 A6NCN8 305 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 RABIFP47224 123 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 CRYBA2P53672 197 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 RAD23AP54725 363 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 HSPB3Q12988 150 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 FADDQ13158 208 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 TDGQ13569 410 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 ZIC1Q15915 447 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 PRRT3Q5FWE3 981 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 BROXQ5VW32 411 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 KIAA0895LQ68EN5 471 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 OR2T5Q6IEZ7 315 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 NRROSQ86YC3 692 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 DCP2Q8IU60 420 aaKnown RBP17.67■□□□□ 0.42
HOXA9-201ENST00000343483 OR2T29Q8NH02 315 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 HDAC2Q92769 488 aaKnown RBP17.67■□□□□ 0.42
HOXA9-201ENST00000343483 NLNQ9BYT8 704 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 SLC2A4RGQ9NR83 387 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 ADPRHL2Q9NX46 363 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 TMEFF2Q9UIK5 374 aaPredicted RBP17.67■□□□□ 0.42
HOXA9-201ENST00000343483 SNX7Q9UNH6 387 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 DNAH14Q0VDD8 3507 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 A0A1B0GVG6 124 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 SUV39H1O43463 412 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 DIRAS1O95057 198 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 KRT75O95678 551 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 DDX5P17844 614 aaKnown RBP17.67■□□□□ 0.42
HOXA9-201ENST00000343483 UQCRC2P22695 453 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 CRHBPP24387 322 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 AHRP35869 848 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 POLR2IP36954 125 aaKnown RBP17.67■□□□□ 0.42
HOXA9-201ENST00000343483 VLDLRP98155 873 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 HYAL2Q12891 473 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 MEP1AQ16819 746 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 RFX4Q33E94 735 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 TOR1AIP1Q5JTV8 583 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 GPR107Q5VW38 600 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 ABI3BPQ7Z7G0 1075 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 TRIM48Q8IWZ4 208 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 CHDHQ8NE62 594 aaPredicted RBP17.67■□□□□ 0.42
HOXA9-201ENST00000343483 OR8K5Q8NH50 307 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 NFKBIDQ8NI38 313 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 UCN3Q969E3 161 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 MS4A6EQ96DS6 147 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 GPR174Q9BXC1 333 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 SYNPO2LQ9H987 977 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 TM9SF3Q9HD45 589 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 CA14Q9ULX7 337 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 PCDHGA4Q9Y5G9 962 aa17.67■□□□□ 0.42
HOXA9-201ENST00000343483 MYO1GB0I1T2 1018 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 C4orf51C9J302 202 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 TBX19O60806 448 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 SEMG1P04279 462 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 CHRNB1P11230 501 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 GSTM2P28161 218 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 GSTM5P46439 218 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 SCARB2Q14108 478 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 ZNF542PQ5EBM4 170 aa17.66■□□□□ 0.42
HOXA9-201ENST00000343483 NDUFAF5Q5TEU4 345 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms