RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 NXPE4Q6UWF7 544 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 THOC6Q86W42 341 aaKnown RBP12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 SCUBE1Q8IWY4 988 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 CLYBLQ8N0X4 340 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 ZNF321PQ8N8H1 164 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 FBXO25Q8TCJ0 367 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 ATL1Q8WXF7 558 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 CCT6BQ92526 530 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 AIF1LQ9BQI0 150 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 TTYH2Q9BSA4 534 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 CNPPD1Q9BV87 410 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 GSX1Q9H4S2 264 aaPredicted RBP12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 ZDHHC11Q9H8X9 412 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 PELI2Q9HAT8 420 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 CLK4Q9HAZ1 481 aaKnown RBP12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 PRTFDC1Q9NRG1 225 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 ZDHHC18Q9NUE0 388 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 ALKBH4Q9NXW9 302 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 Q9UFV3 132 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 SLC22A14Q9Y267 594 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 L3MBTL1Q9Y468 752 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 MMACHCQ9Y4U1 282 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 VPS13CQ709C8 3753 aa12.8□□□□□ -0.36
UPK3BL1-201ENST00000340457 ACOT7O00154 380 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 IFNA16P05015 189 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 SERPINA6P08185 405 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 PGAM1P18669 254 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 IVDP26440 423 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 HNRNPH1P31943 449 aaKnown RBP12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 ADH7P40394 386 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 ZFP36L2P47974 494 aaKnown RBP12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 BMPR2Q13873 1038 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 ZDHHC24Q6UX98 284 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 B3GNT6Q6ZMB0 384 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 TMEM251Q8N6I4 163 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 NAT8LQ8N9F0 302 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 FAR2Q96K12 515 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 RASL10BQ96S79 203 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 GPATCH1Q9BRR8 931 aaKnown RBP12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 POLDIP3Q9BY77 421 aaKnown RBP12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 ACBD3Q9H3P7 528 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 ZNF358Q9NW07 568 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 ACAD8Q9UKU7 415 aa12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 PPIEQ9UNP9 301 aaKnown RBP12.79□□□□□ -0.36
UPK3BL1-201ENST00000340457 ATP6AP2A0A1C7CYW4 349 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 CDC7O00311 574 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 ERI3O43414 337 aaKnown RBP12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 ZNF354AO60765 605 aaPredicted RBP12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 CTAG2O75638 210 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 ATP6AP2O75787 350 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 GLSO94925 669 aaPredicted RBP12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 DNASE1L1P49184 302 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 PLA2G16P53816 162 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 ARL4CP56559 192 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 FOLH1Q04609 750 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 TERF2Q15554 542 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 MSS51Q4VC12 460 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 HP1BP3Q5SSJ5 553 aaPredicted RBP12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 ARSKQ6UWY0 536 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 TRILQ7L0X0 811 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 WDR53Q7Z5U6 358 aaPredicted RBP12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 SLC22A16Q86VW1 577 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 IGDCC3Q8IVU1 814 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 KLHDC8AQ8IYD2 350 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 GAL3ST3Q96A11 431 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 SCYL1Q96KG9 808 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 CSF3RQ99062 836 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 FOXC2Q99958 501 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 CXXC4Q9H2H0 198 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 ADAP2Q9NPF8 381 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 SEMA4BQ9NPR2 832 aaPredicted RBP12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 PPANQ9NQ55 473 aaKnown RBP12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 MYOTQ9UBF9 498 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 ST6GALNAC2Q9UJ37 374 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 PLEKHA6Q9Y2H5 1048 aa12.78□□□□□ -0.36
UPK3BL1-201ENST00000340457 NPEPPSL1A6NEC2 478 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 FIGNL2A6NMB9 653 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 CLDN4O14493 209 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 BCKDKO14874 412 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 EIF3HO15372 352 aaKnown RBP eCLIP12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 GDF5P43026 501 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 HK2P52789 917 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 HSD17B7P56937 341 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 RAB38P57729 211 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 STXBP1P61764 594 aaKnown RBP12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 FOXD4Q12950 439 aaPredicted RBP12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 TRADDQ15628 312 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 PPP1R3AQ16821 1122 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 BEND6Q5SZJ8 279 aaPredicted RBP12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 HSDL2Q6YN16 418 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 GK5Q6ZS86 529 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 FAM47EQ6ZV65 393 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 CCDC25Q86WR0 208 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 MREGQ8N565 214 aa12.77□□□□□ -0.37
UPK3BL1-201ENST00000340457 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms