RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ARFIP1P53367 373 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 SLAMF1Q13291 335 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 CUL3Q13618 768 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 ESPL1Q14674 2120 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 EIF2S3LQ2VIR3 472 aaKnown RBP13.65□□□□□ -0.22
ERCC1-203ENST00000340192 FAM180AQ6UWF9 173 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 RPS19BP1Q86WX3 136 aaKnown RBP13.65□□□□□ -0.22
ERCC1-203ENST00000340192 APCDD1LQ8NCL9 501 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 PRR7Q8TB68 274 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 ACMSDQ8TDX5 336 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 ZNF483Q8TF39 744 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-203ENST00000340192 MZB1Q8WU39 189 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 FAR1Q8WVX9 515 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 MTFMTQ96DP5 389 aaKnown RBP13.65□□□□□ -0.22
ERCC1-203ENST00000340192 SIGLEC12Q96PQ1 595 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 TAAR6Q96RI8 345 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 UTP23Q9BRU9 249 aaKnown RBP13.65□□□□□ -0.22
ERCC1-203ENST00000340192 C1QTNF3Q9BXJ4 246 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 ANKZF1Q9H8Y5 726 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 ADAP2Q9NPF8 381 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 TRBV11-1A0A0K0K1C0 115 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 A0A1B0GTL3 188 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 BLACEA4D250 179 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 ANKUB1A6NFN9 424 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 GABRR3A8MPY1 467 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 FOXO6A8MYZ6 492 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 PPP6CO00743 305 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 EEDO75530 441 aaKnown RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 IFNA16P05015 189 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 TSPAN8P19075 237 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 TAC1P20366 129 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 TPP2P29144 1249 aaPredicted RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 CD96P40200 585 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 CDH13P55290 713 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 HERVK_113P63132 956 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 STX4Q12846 297 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 ELAVL1Q15717 326 aaKnown RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 INAQ16352 499 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 GGTA1PQ4G0N0 100 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 FRG2Q64ET8 278 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 TTC19Q6DKK2 380 aaPredicted RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 MILR1Q7Z6M3 343 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 GPR180Q86V85 440 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 CNPY4Q8N129 248 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 LGI4Q8N135 537 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 BCORP1Q8N888 145 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 OR4F6Q8NGB9 312 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 FRG2BQ96QU4 278 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 ERVK-6Q9BXR3 956 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 ZNF717Q9BY31 904 aaPredicted RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 ALOXE3Q9BYJ1 711 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 DEFB126Q9BYW3 111 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 MS4A12Q9NXJ0 267 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 PSD3Q9NYI0 1048 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 PPIEQ9UNP9 301 aaKnown RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 ATG4BQ9Y4P1 393 aa13.64□□□□□ -0.23
ERCC1-203ENST00000340192 FLNBO75369 2602 aaKnown RBP13.64□□□□□ -0.23
ERCC1-203ENST00000340192 USP9XQ93008 2570 aaPredicted RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 A0A1W2PPM1 405 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 SYNDIG1LA6NDD5 238 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 DLX3O60479 287 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 OTCP00480 354 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 GSTA1P08263 222 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 BSGP35613 385 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 SLCO1A2P46721 670 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 CLCN2P51788 898 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 GPR143P51810 404 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 MLF1P58340 268 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ID2Q02363 134 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ELOAQ14241 798 aaKnown RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 OR1C1Q15619 314 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ZNF766Q5HY98 468 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 FHL5Q5TD97 284 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 SPINK14Q6IE38 97 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 LETMD1Q6P1Q0 360 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ARMC10Q8N2F6 343 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 TMEM132CQ8N3T6 1108 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 MDS2Q8NDY4 140 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 THAP3Q8WTV1 239 aaPredicted RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 PTPMT1Q8WUK0 201 aaPredicted RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 NCLNQ969V3 563 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ANKRD9Q96BM1 317 aaPredicted RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 VMP1Q96GC9 406 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 SERPINI1Q99574 410 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 DDX31Q9H8H2 851 aaKnown RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 OLAHQ9NV23 265 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 VTI1BQ9UEU0 232 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 PHF11Q9UIL8 331 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 ZNF223Q9UK11 482 aaPredicted RBP13.63□□□□□ -0.23
ERCC1-203ENST00000340192 PPT2Q9UMR5 302 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 CLCA3PQ9Y6N3 262 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 LRRK2Q5S007 2527 aa13.63□□□□□ -0.23
ERCC1-203ENST00000340192 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
ERCC1-203ENST00000340192 SMIM23A6NLE4 172 aa13.62□□□□□ -0.23
ERCC1-203ENST00000340192 PROM1O43490 865 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms