RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SGCGQ13326 291 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 HSDL1Q3SXM5 330 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SLC35D3Q5M8T2 416 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SPOUT1Q5T280 376 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RNLSQ5VYX0 342 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 KIAA1161Q6NSJ0 714 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CLEC2AQ6UVW9 174 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 AHSA2Q719I0 299 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CHST15Q7LFX5 561 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TRMT11Q7Z4G4 463 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 L3MBTL4Q8NA19 623 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ZSCAN1Q8NBB4 408 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PAQR8Q8TEZ7 354 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SLAMF9Q96A28 289 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PABPC5Q96DU9 382 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MYO19Q96H55 970 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 POM121Q96HA1 1249 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MSLNLQ96KJ4 702 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CMSS1Q9BQ75 279 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 FUZQ9BT04 418 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 KATNB1Q9BVA0 655 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TM6SF2Q9BZW4 377 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ACTR8Q9H981 624 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CHRAC1Q9NRG0 131 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RNF146Q9NTX7 359 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 A0A0A6YYH2 397 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 A6NJ64 397 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SPATA31C2B4DYI2 1134 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 M0QYT0 321 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PCDHGA12O60330 932 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 IL33O95760 270 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PEX11BO96011 259 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 HTR1AP08908 422 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CYP4B1P13584 511 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ACVR2AP27037 513 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PPM1AP35813 382 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 LIPAP38571 399 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 VAMP7P51809 220 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 FOXK2Q01167 660 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 EVX2Q03828 476 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 VMACQ2NL98 169 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CDC73Q6P1J9 531 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SPNS3Q6ZMD2 512 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 IL34Q6ZMJ4 242 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ZDHHC17Q8IUH5 632 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SYNE4Q8N205 404 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR10A7Q8NGE5 316 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RPLP0P6Q8NHW5 317 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TAAR8Q969N4 342 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR14A2Q96R54 314 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MMP19Q99542 508 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 COMMD4Q9H0A8 199 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 LMAN1LQ9HAT1 526 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SIRT7Q9NRC8 400 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 DZANK1Q9NVP4 752 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM248Q9NWD8 314 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PARPBPQ9NWS1 579 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 LUZP4Q9P127 313 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 FBXL2Q9UKC9 423 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 IKZF3Q9UKT9 509 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 POMT1Q9Y6A1 747 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 POM121CA8CG34 1229 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NEDD8-MDP1E9PL57 170 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NR5A2O00482 541 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PITPNM1O00562 1244 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 DSCR3O14972 297 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 XPNPEP2O43895 674 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PTCD1O75127 700 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 STARD3NLO95772 234 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 IGKV5-2P06315 115 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 BMP7P18075 431 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RHCEP18577 417 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GGT1P19440 569 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 BCKDHBP21953 392 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MAGEA12P43365 314 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GCLMP48507 274 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TIMM10P62072 90 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RPL6Q02878 288 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 C2orf80Q0P641 193 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 FABP9Q0Z7S8 132 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 DUOXA2Q1HG44 320 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ANGPTL5Q86XS5 388 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 FAM156AQ8NDB6 213 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MRGPRDQ8TDS7 321 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ING5Q8WYH8 240 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PKMYT1Q99640 499 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 C11orf70Q9BRQ4 267 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CNPPD1Q9BV87 410 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NLNQ9BYT8 704 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TSPAN10Q9H1Z9 355 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GALNT9Q9HCQ5 603 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CLN6Q9NWW5 311 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GHRLQ9UBU3 117 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR12D3Q9UGF7 316 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SLC22A14Q9Y267 594 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PCDHB14Q9Y5E9 798 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PCDHA10Q9Y5I2 948 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 A0A087X0M5 115 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 A0A1B0GX30 115 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 A0A1W2PPC1 479 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms