RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 USE1Q9NZ43 259 aa10.55□□□□□ -0.72
LRP1-202ENST00000338962 IFT80Q9P2H3 777 aaPredicted RBP10.55□□□□□ -0.72
LRP1-202ENST00000338962 C3orf18Q9UK00 162 aa10.55□□□□□ -0.72
LRP1-202ENST00000338962 ACSL6Q9UKU0 697 aa10.55□□□□□ -0.72
LRP1-202ENST00000338962 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.55□□□□□ -0.72
LRP1-202ENST00000338962 ORC6Q9Y5N6 252 aa10.55□□□□□ -0.72
LRP1-202ENST00000338962 AP1M2Q9Y6Q5 423 aa10.55□□□□□ -0.72
LRP1-202ENST00000338962 hCG_2039718K7EN88 272 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 VILLO15195 856 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 SUV39H1O43463 412 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 HS6ST1O60243 411 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 ATP6V1G1O75348 118 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 OR6B1O95007 311 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 KRT75O95678 551 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 HNRNPA2B1P22626 353 aaKnown RBP10.54□□□□□ -0.72
LRP1-202ENST00000338962 MVDP53602 400 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 CASP9P55211 416 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 ABATP80404 500 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 SRSF5Q13243 272 aaKnown RBP10.54□□□□□ -0.72
LRP1-202ENST00000338962 PLCL1Q15111 1095 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 SLC5A12Q1EHB4 618 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 PLK5Q496M5 336 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 COX20Q5RI15 118 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 GCNT6Q5T4J0 391 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 TTC23Q5W5X9 447 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 PMS2CLQ68D20 193 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 ADGRF3Q8IZF5 1079 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 ZNF555Q8NEP9 628 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 OR1E3Q8WZA6 343 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 TM4SF18Q96CE8 201 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 MUS81Q96NY9 551 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 ING2Q9H160 280 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 TOR3AQ9H497 397 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 RAD21L1Q9H4I0 556 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 GPATCH2Q9NW75 528 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 TBC1D29Q9UFV1 150 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 ABCG2Q9UNQ0 655 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 CA5BQ9Y2D0 317 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 MAP4K5Q9Y4K4 846 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 SNX8Q9Y5X2 465 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 HEATR5BQ9P2D3 2071 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 ZNF318Q5VUA4 2279 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 KMT2EQ8IZD2 1858 aa10.54□□□□□ -0.72
LRP1-202ENST00000338962 GOLGA4Q13439 2230 aaKnown RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 A0A087WXM4 84 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 PRAMEF33A0A0G2JMD5 474 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 A0A1W2PPC4 97 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 TRBC2A0A5B9 178 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 MYO1GB0I1T2 1018 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 LCMT2O60294 686 aaKnown RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 TNFRSF21O75509 655 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 NDUFS1P28331 727 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 SSR2P43308 183 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 GSTM5P46439 218 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 PLA2G16P53816 162 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 VLDLRP98155 873 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 RBBP4Q09028 425 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 FAM180BQ6P0A1 224 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 SHQ1Q6PI26 577 aaKnown RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 TMEM26Q6ZUK4 368 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 TMEM179BQ7Z7N9 219 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 RNF130Q86XS8 419 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 FAM20CQ8IXL6 584 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 TBC1D19Q8N5T2 526 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 NATD1Q8N6N6 113 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 ARL10Q8N8L6 244 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 OR2L3Q8NG85 312 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 TBC1D20Q96BZ9 403 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 C17orf62Q9BQA9 187 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 NLNQ9BYT8 704 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 IRF2BPLQ9H1B7 796 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 KIR3DX1Q9H7L2 352 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 TM9SF3Q9HD45 589 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 NEUROD4Q9HD90 331 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 LHX9Q9NQ69 397 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 SCHIP1Q9P0W5 487 aaPredicted RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 ADAM29Q9UKF5 820 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 ITGB1BP2Q9UKP3 347 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 LRIT2A6NDA9 550 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 PDPK1O15530 556 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 SEMG1P04279 462 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 PRKACGP22612 351 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 AK4P27144 223 aaPredicted RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 GSTM2P28161 218 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 SHMT2P34897 504 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 RAD23AP54725 363 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 MANFP55145 182 aaKnown RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 CDH15P55291 814 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 TPD52P55327 224 aaPredicted RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 SCARB2Q14108 478 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 PRSS53Q2L4Q9 553 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 RFX4Q33E94 735 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 TMEM35AQ53FP2 167 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 ZC3H14Q6PJT7 736 aaKnown RBP10.53□□□□□ -0.72
LRP1-202ENST00000338962 TMEM145Q8NBT3 493 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 C1orf216Q8TAB5 229 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 CREB3L4Q8TEY5 395 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 C17orf50Q8WW18 174 aa10.53□□□□□ -0.72
LRP1-202ENST00000338962 LCN9Q8WX39 176 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms