RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ST3GAL2Q16842 350 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 ATP6AP1LQ52LC2 224 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 FAM219BQ5XKK7 198 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 GALNT18Q6P9A2 607 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 INO80CQ6PI98 192 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 PIWIL2Q8TC59 973 aaKnown RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 TANKQ92844 425 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 TUBGCP3Q96CW5 907 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 C19orf60Q96EN9 201 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 C7orf26Q96N11 449 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 CATSPER2Q96P56 530 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 FAIM2Q9BWQ8 316 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 ZNF717Q9BY31 904 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 VN1R1Q9GZP7 353 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 RPF2Q9H7B2 306 aaKnown RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 PRDM9Q9NQV7 894 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 LANCL2Q9NS86 450 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 C19orf25Q9UFG5 118 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 PSME2Q9UL46 239 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 TMED5Q9Y3A6 229 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 ATG4BQ9Y4P1 393 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 MMACHCQ9Y4U1 282 aa11.22□□□□□ -0.61
SPTLC1-202ENST00000337841 URB1O60287 2271 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 AHCTF1Q8WYP5 2266 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 SDK2Q58EX2 2172 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 A0A1W2PR48 441 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 PCDH7O60245 1069 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 PEX11AO75192 247 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 CDC123O75794 336 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 C8orf89P0DMQ9 161 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 PRKAR1AP10644 381 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 DRD2P14416 443 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 WT1P19544 449 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 MAPK1P28482 360 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 PPP2R1BP30154 601 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 TIA1P31483 386 aaKnown RBP eCLIP11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 CXADRP78310 365 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 STX4Q12846 297 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 MAD2L1Q13257 205 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 GALNTL6Q49A17 601 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 FAM69BQ5VUD6 431 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 FAAH2Q6GMR7 532 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 NOXRED1Q6NXP6 359 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 QSOX2Q6ZRP7 698 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 RGS9BPQ6ZS82 235 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 WDR75Q8IWA0 830 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 FAM47BQ8NA70 645 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 TM4SF18Q96CE8 201 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 RBCK1Q9BYM8 510 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 CPNE5Q9HCH3 593 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 POLHQ9Y253 713 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.61
SPTLC1-202ENST00000337841 SEC16AO15027 2179 aa11.21□□□□□ -0.62
SPTLC1-202ENST00000337841 MDC1Q14676 2089 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 ATP6AP2A0A1C7CYW4 349 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 C1orf226A1L170 272 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 TCP11X1B4DZS4 312 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 LSM1O15116 133 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 ATP6AP2O75787 350 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 NR2F6P10588 404 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 MDH1P40925 334 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 HNRNPH2P55795 449 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 FOXL2P58012 376 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 TAS2R50P59544 299 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 RAE1P78406 368 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 BTG2P78543 158 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 RHAGQ02094 409 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 TNFRSF17Q02223 184 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 C2orf80Q0P641 193 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 CDC20Q12834 499 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 SERTAD2Q14140 314 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 HEPACAMQ14CZ8 416 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 KIAA0040Q15053 153 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 SMU1Q2TAY7 513 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 RFTN2Q52LD8 501 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 XKR7Q5GH72 579 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 C6orf136Q5SQH8 315 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 C18orf63Q68DL7 685 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 TMEM205Q6UW68 189 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 CPEB2Q7Z5Q1 589 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 PPP1R32Q7Z5V6 425 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 OR2T11Q8NH01 316 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 ADAMTS17Q8TE56 1095 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 C16orf78Q8WTQ4 265 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 C11orf24Q96F05 449 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 C3orf30Q96M34 536 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 FER1L6-AS2Q96M78 137 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 NUF2Q9BZD4 464 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 SLCO1B3Q9NPD5 702 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 P4HTMQ9NXG6 502 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 MARCOQ9UEW3 520 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 EIF3LQ9Y262 564 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 DLGAP4Q9Y2H0 992 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 PCDHA9Q9Y5H5 950 aa11.2□□□□□ -0.62
SPTLC1-202ENST00000337841 AKAP13Q12802 2813 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 SPEGQ15772 3267 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 OR2W5A6NFC9 320 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 TGDSO95455 350 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 GPR75O95800 540 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms