RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TXLNGQ9NUQ3 528 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 C5AR2Q9P296 337 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 SATB2Q9UPW6 733 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 PCDHA9Q9Y5H5 950 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 SCN2AQ99250 2005 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 LOC100653049A0A140TA62 436 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 ASPDHA6ND91 283 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 GLOD5A6NK44 160 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 PGRMC2O15173 223 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 KRT34O76011 436 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 JMJD7P0C870 316 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 COX4I1P13073 169 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 CPN2P22792 545 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 HPCAL1P37235 193 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 HNRNPFP52597 415 aaKnown RBP20.3■□□□□ 0.84
TPM1-204ENST00000334895 RAB38P57729 211 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 HEPACAMQ14CZ8 416 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 C3orf38Q5JPI3 329 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 PRMT9Q6P2P2 845 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 TICAM1Q8IUC6 712 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 FAM47BQ8NA70 645 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 TMEM52Q8NDY8 209 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 WDR36Q8NI36 951 aaKnown RBP20.3■□□□□ 0.84
TPM1-204ENST00000334895 VPS33AQ96AX1 596 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 ZBTB18Q99592 522 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 CLK4Q9HAZ1 481 aaKnown RBP20.3■□□□□ 0.84
TPM1-204ENST00000334895 SLC22A11Q9NSA0 550 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 WDFY3Q8IZQ1 3526 aa20.3■□□□□ 0.84
TPM1-204ENST00000334895 FAM227AF5H4B4 570 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 EBAG9O00559 213 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 GUCY1B2O75343 617 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 T-ENOLP0DO92 83 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 NR2F6P10588 404 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 LAMP1P11279 417 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 COX7A2P14406 83 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 DRD2P14416 443 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 ALDH9A1P49189 494 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 RAB15P59190 212 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 FOXC1Q12948 553 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 DSG2Q14126 1118 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 MPEG1Q2M385 716 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 VPS26BQ4G0F5 336 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 TIGD2Q4W5G0 525 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 DCAF12Q5T6F0 453 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 CEACAM20Q6UY09 585 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 COX15Q7KZN9 410 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 CAMKMTQ7Z624 323 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 OR51Q1Q8NH59 317 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 COQ8BQ96D53 544 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 CLIP3Q96DZ5 547 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 SPDL1Q96EA4 605 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 PEX11GQ96HA9 241 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 TAAR9Q96RI9 348 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 FAIM2Q9BWQ8 316 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 SLC7A5P2Q9GIP4 190 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 ZNF304Q9HCX3 659 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 MS4A12Q9NXJ0 267 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 CES1P1Q9UKY3 287 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 CDC14AQ9UNH5 594 aa20.29■□□□□ 0.84
TPM1-204ENST00000334895 FBP2O00757 339 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 CPNE3O75131 537 aaKnown RBP20.28■□□□□ 0.84
TPM1-204ENST00000334895 KIAA0754O94854 1291 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 SNRPB2P08579 225 aaKnown RBP20.28■□□□□ 0.84
TPM1-204ENST00000334895 ATXN8OSP0DMR3 200 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 PRDX6P30041 224 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 WNT3P56703 355 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 FAM180BQ6P0A1 224 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 RP9Q8TA86 221 aaKnown RBP20.28■□□□□ 0.84
TPM1-204ENST00000334895 MTERF3Q96E29 417 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 ZNF764Q96H86 408 aaPredicted RBP20.28■□□□□ 0.84
TPM1-204ENST00000334895 DDA1Q9BW61 102 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 RBCK1Q9BYM8 510 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 MAPRE3Q9UPY8 281 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 CROCCQ5TZA2 2017 aa20.28■□□□□ 0.84
TPM1-204ENST00000334895 C1orf226A1L170 272 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 C9orf172C9J069 976 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 TBX19O60806 448 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 PGRP06401 933 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 HBQ1P09105 142 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 RNH1P13489 461 aaKnown RBP20.27■□□□□ 0.84
TPM1-204ENST00000334895 BUD31P41223 144 aaPredicted RBP20.27■□□□□ 0.84
TPM1-204ENST00000334895 KCNK10P57789 538 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 CYLC2Q14093 348 aaPredicted RBP20.27■□□□□ 0.84
TPM1-204ENST00000334895 SPRED3Q2MJR0 410 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 PGS1Q32NB8 556 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 CPTPQ5TA50 214 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 OR4F3Q6IEY1 312 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 SLC48A1Q6P1K1 146 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 TMPRSS7Q7RTY8 843 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 R3HCC1LQ7Z5L2 792 aaKnown RBP20.27■□□□□ 0.84
TPM1-204ENST00000334895 OR8J2Q8NGG1 315 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 STARD8Q92502 1023 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 PPCDCQ96CD2 204 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 MIEF1Q9NQG6 463 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 EHD3Q9NZN3 535 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 SH3BP4Q9P0V3 963 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 TAGLN3Q9UI15 199 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 MAP4K5Q9Y4K4 846 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 PCDHGA3Q9Y5H0 932 aa20.27■□□□□ 0.84
TPM1-204ENST00000334895 SCN2BO60939 215 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms