RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PXNP49023 591 aaPredicted RBP11.76□□□□□ -0.53
VPS33B-201ENST00000333371 PCYT1AP49585 367 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 KCNC3Q14003 757 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 ARHGAP15Q53QZ3 475 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 PAQR6Q6TCH4 344 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 OLIG3Q7RTU3 272 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 ADIPOR2Q86V24 386 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 DENND6BQ8NEG7 585 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 RAB8BQ92930 207 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 TRMT61AQ96FX7 289 aaKnown RBP11.76□□□□□ -0.53
VPS33B-201ENST00000333371 TXNDC15Q96J42 360 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 YIPF2Q9BWQ6 316 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 BHLHE41Q9C0J9 482 aaPredicted RBP11.76□□□□□ -0.53
VPS33B-201ENST00000333371 NUAK2Q9H093 628 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 RERGLQ9H628 205 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 WDR70Q9NW82 654 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 FTSJ1Q9UET6 329 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 ATP6V1HQ9UI12 483 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 HCN4Q9Y3Q4 1203 aa11.76□□□□□ -0.53
VPS33B-201ENST00000333371 PIPSLA2A3N6 862 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 HIDE1A8MVS5 230 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 RFXAPO00287 272 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 ATG13O75143 517 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 CCNB2O95067 398 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 FGBP02675 491 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 HSD3B1P14060 373 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 AZGP1P25311 298 aaKnown RBP11.75□□□□□ -0.53
VPS33B-201ENST00000333371 HSD3B2P26439 372 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 CTNNB1P35222 781 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 ERVFC1P60507 584 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 POLR2LP62875 67 aaKnown RBP11.75□□□□□ -0.53
VPS33B-201ENST00000333371 IFITM2Q01629 132 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 SEC23BQ15437 767 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 BCL2A1Q16548 175 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 DEPDC4Q8N2C3 294 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 GLYATL1Q969I3 302 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 NEDD4LQ96PU5 975 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 SLC6A16Q9GZN6 736 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 ANKHQ9HCJ1 492 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 DMRT3Q9NQL9 472 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 HCFC2Q9Y5Z7 792 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 SAGE2PA6NJ88 616 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 A8MV72 311 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-201ENST00000333371 RGS5O15539 181 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 GPR37L1O60883 481 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 MED26O95402 600 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 C1orf105O95561 183 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 RECQLP46063 649 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-201ENST00000333371 LIMS1P48059 325 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 CDC42P60953 191 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF45Q02386 682 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 PRKCDQ05655 676 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 TEAD2Q15562 447 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 C6orf183Q5T699 404 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 NXNL2Q5VZ03 156 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 ZDHHC20Q5W0Z9 365 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 FRMPD2BQ6IN97 320 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 TAGAPQ8N103 731 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 GEMIN6Q8WXD5 167 aaKnown RBP11.75□□□□□ -0.53
VPS33B-201ENST00000333371 AP2M1Q96CW1 435 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 MAGEB10Q96LZ2 347 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-201ENST00000333371 CEP44Q9C0F1 390 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 HOXD1Q9GZZ0 328 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 TPK1Q9H3S4 243 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 CXorf36Q9H7Y0 433 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 SLAMF7Q9NQ25 335 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 THSD1Q9NS62 852 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 TAS2R9Q9NYW1 312 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 CCDC59Q9P031 241 aaKnown RBP11.75□□□□□ -0.53
VPS33B-201ENST00000333371 PRKAB1Q9Y478 270 aa11.75□□□□□ -0.53
VPS33B-201ENST00000333371 A0A1W2PRB8 838 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 SMIM30A4D0T7 59 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 PLK4O00444 970 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 LRRTM2O43300 516 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 ASNA1O43681 348 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 TYRP14679 529 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 RPS19P39019 145 aaKnown RBP11.74□□□□□ -0.53
VPS33B-201ENST00000333371 CRISP1P54107 249 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 HTRA4P83105 476 aaPredicted RBP11.74□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF284Q2VY69 593 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 OR8H2Q8N162 312 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 TRAM1L1Q8N609 369 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 GOT1L1Q8NHS2 421 aaPredicted RBP11.74□□□□□ -0.53
VPS33B-201ENST00000333371 OPALINQ96PE5 141 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 BARHL1Q9BZE3 327 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 TAAR2Q9P1P5 351 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 SNX11Q9Y5W9 270 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 ENPP4Q9Y6X5 453 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 ZAR1LA6NP61 321 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 LOC110117498-PIK3R3F6TDL0 507 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 TPST2O60704 377 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 AP2A2O94973 939 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 BCHEP06276 602 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 CYP2A6P11509 494 aaPredicted RBP11.74□□□□□ -0.53
VPS33B-201ENST00000333371 PTGER1P34995 402 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 PRLHRP49683 370 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 PCBP3P57721 371 aaKnown RBP11.74□□□□□ -0.53
VPS33B-201ENST00000333371 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS33B-201ENST00000333371 MXD1Q05195 221 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms