RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ASAH1Q13510 395 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 VEPH1Q14D04 833 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 DBF4BQ8NFT6 615 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 ASZ1Q8WWH4 475 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 TMEM203Q969S6 136 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 MND1Q9BWT6 205 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 PRRG3Q9BZD7 231 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 STOX2Q9P2F5 926 aaPredicted RBP22.55■■□□□ 1.2
TSKU-201ENST00000333090 IQCMA0A1B0GVH7 501 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 SMIM30A4D0T7 59 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 FABP12A6NFH5 140 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 FAM25AB3EWG3 89 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 FAM25CB3EWG5 89 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 FAM25GB3EWG6 89 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 CSF3P09919 207 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 ENDOUP21128 410 aaKnown RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 ZNF763Q0D2J5 394 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 HNRNPA0Q13151 305 aaKnown RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 ZNF770Q6IQ21 691 aaPredicted RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 CAMKK1Q8N5S9 505 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 OR9Q1Q8NGQ5 310 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 GOT1L1Q8NHS2 421 aaPredicted RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 NDUFB11Q9NX14 153 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 A0A1W2PQL4 384 aaPredicted RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 B4DXG7 233 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 AP2A2O94973 939 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 CLEC2LP0C7M8 214 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 SSTR4P31391 388 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 CSNK1DP48730 415 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 LRRC74AQ0VAA2 488 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 KCNC3Q14003 757 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 ZNF630Q2M218 657 aaPredicted RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 GLYR1Q49A26 553 aaPredicted RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 YIF1BQ5BJH7 314 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 VWA5B2Q8N398 1253 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 SCAMP4Q969E2 229 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 WRAP53Q9BUR4 548 aaKnown RBP22.54■■□□□ 1.2
TSKU-201ENST00000333090 ANGPT4Q9Y264 503 aa22.54■■□□□ 1.2
TSKU-201ENST00000333090 FFAR1O14842 300 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 TPST2O60704 377 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 SLC16A8O95907 504 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 RECKO95980 971 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 BDKRB1P46663 353 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 HOXC5Q00444 222 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 LMAN2Q12907 356 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 TSTA3Q13630 321 aaPredicted RBP22.53■■□□□ 1.2
TSKU-201ENST00000333090 E2F2Q14209 437 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 FAM214AQ32MH5 1076 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 SLC8B1Q6J4K2 584 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 TMPRSS11BQ86T26 416 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 PHC2Q8IXK0 858 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 CADM2Q8N3J6 435 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 JPH3Q8WXH2 748 aaPredicted RBP22.53■■□□□ 1.2
TSKU-201ENST00000333090 PPCDCQ96CD2 204 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 FRMD6Q96NE9 622 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 FZD3Q9NPG1 666 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 ATP6V1HQ9UI12 483 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 CDH23Q9H251 3354 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 A0A0B4J293 547 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 MYL12BO14950 172 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 GSTM1P09488 218 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 CTSOP43234 321 aaPredicted RBP22.53■■□□□ 1.2
TSKU-201ENST00000333090 SPINT3P49223 89 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 LIM2P55344 173 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 ZNF91Q05481 1191 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 PCDH1Q08174 1060 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 MPEG1Q2M385 716 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.53■■□□□ 1.21e-6■■■■□ 22.2
TSKU-201ENST00000333090 ARL14EPQ8N8R7 260 aaPredicted RBP22.53■■□□□ 1.2
TSKU-201ENST00000333090 GALNT6Q8NCL4 622 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 GRPEL2Q8TAA5 225 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 SLC25A46Q96AG3 418 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 RNF31Q96EP0 1072 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 UCK2Q9BZX2 261 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 MIXL1Q9H2W2 232 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 SUV39H2Q9H5I1 410 aa22.53■■□□□ 1.2
TSKU-201ENST00000333090 TSPAN19P0C672 248 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 CD70P32970 193 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 PCBP3P57721 371 aaKnown RBP22.52■■□□□ 1.2
TSKU-201ENST00000333090 C1DQ13901 141 aaKnown RBP22.52■■□□□ 1.2
TSKU-201ENST00000333090 PUM1Q14671 1186 aaKnown RBP eCLIP22.52■■□□□ 1.2
TSKU-201ENST00000333090 IER5LQ5T953 404 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 CASP12Q6UXS9 341 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 CCDC149Q6ZUS6 474 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 COMMD6Q7Z4G1 85 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 RASSF5Q8WWW0 418 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 SLC6A18Q96N87 628 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 B4GALT6Q9UBX8 382 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 DSPPQ9NZW4 1301 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 KPNA5O15131 536 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 OSMP13725 252 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 ITGB7P26010 798 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 PREPP48147 710 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 CCL23P55773 120 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 SNRPGP62308 76 aaKnown RBP22.52■■□□□ 1.2
TSKU-201ENST00000333090 C2orf80Q0P641 193 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 PYDC2Q56P42 97 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 FAM209AQ5JX71 171 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 MEDAGQ5VYS4 303 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 C22orf42Q6IC83 251 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms