RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SGPP1Q9BX95 441 aa14.67□□□□□ -0.06
BRCC3-201ENST00000330045 ROGDIQ9GZN7 287 aa14.67□□□□□ -0.06
BRCC3-201ENST00000330045 SPNS1Q9H2V7 528 aa14.67□□□□□ -0.06
BRCC3-201ENST00000330045 CNOT2Q9NZN8 540 aaKnown RBP14.67□□□□□ -0.06
BRCC3-201ENST00000330045 RHCGQ9UBD6 479 aa14.67□□□□□ -0.06
BRCC3-201ENST00000330045 ZAR1LA6NP61 321 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 HAT1O14929 419 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 COQ9O75208 318 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 KCNK2O95069 426 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 PTTG1O95997 202 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 IFNW1P05000 195 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 ALOX12P18054 663 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 CHMP24386 653 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 SOX6P35712 828 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 MMP12P39900 470 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 CRISP1P54107 249 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 NTHL1P78549 312 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 GRIN2CQ14957 1233 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 DUSP7Q16829 419 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 TOR1AIP1Q5JTV8 583 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 FRMPD2BQ6IN97 320 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 ZNF557Q8N988 423 aaPredicted RBP14.66□□□□□ -0.06
BRCC3-201ENST00000330045 OR9A1PQ8NGU1 263 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 SLC5A11Q8WWX8 675 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 NMNAT1Q9HAN9 279 aaPredicted RBP14.66□□□□□ -0.06
BRCC3-201ENST00000330045 CLN6Q9NWW5 311 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 FTSJ1Q9UET6 329 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 HCFC2Q9Y5Z7 792 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 SNPHO15079 494 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 KIAA0513O60268 411 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 DNTTP04053 509 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 IL3P08700 152 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 CNR2P34972 360 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 DSTNP60981 165 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 KCNJ8Q15842 424 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 TSTQ16762 297 aaKnown RBP14.66□□□□□ -0.06
BRCC3-201ENST00000330045 TIMM50Q3ZCQ8 353 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 ZNF658BQ4V348 819 aaPredicted RBP14.66□□□□□ -0.06
BRCC3-201ENST00000330045 LY6G5CQ5SRR4 150 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 NXPE4Q6UWF7 544 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 UNC5DQ6UXZ4 953 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 SLC44A2Q8IWA5 706 aaPredicted RBP14.66□□□□□ -0.06
BRCC3-201ENST00000330045 TAGAPQ8N103 731 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 CYP4Z2PQ8N1L4 340 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 SPPL3Q8TCT6 385 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 TXNDC15Q96J42 360 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 SLC6A16Q9GZN6 736 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 EPHX3Q9H6B9 360 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 ITM2BQ9Y287 266 aa14.66□□□□□ -0.06
BRCC3-201ENST00000330045 LINC01553A4QN01 128 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ARRDC5A6NEK1 342 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ADRA2AP08913 450 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 EPCAMP16422 314 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 MAGP20916 626 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 POU1F1P28069 291 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 BMPR1AP36894 532 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 TAP2Q03519 686 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 CARTPTQ16568 116 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ERAP2Q6P179 960 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 C19orf48Q6RUI8 117 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 SLC30A8Q8IWU4 369 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 GPR65Q8IYL9 337 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 SCAIQ8N9R8 606 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 SLC35B4Q969S0 331 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 EFHD2Q96C19 240 aaPredicted RBP14.65□□□□□ -0.06
BRCC3-201ENST00000330045 MIEF1Q9NQG6 463 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 DKK3Q9UBP4 350 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 MKLN1Q9UL63 735 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 PNMA8CA0A1B0GUJ8 204 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 CCRL2O00421 344 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 RECKO95980 971 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ADH1AP07327 375 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 SPNP16150 400 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 UQCRC2P22695 453 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 HOXD12P35452 270 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 PIK3CBP42338 1070 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ATAD3BQ5T9A4 648 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 PLAG1Q6DJT9 500 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 REEP3Q6NUK4 255 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 AKAP14Q86UN6 197 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 TRAPPC5Q8IUR0 188 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 NRSN1Q8IZ57 195 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 MRPL43Q8N983 215 aaKnown RBP14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ZNF740Q8NDX6 193 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ST13P5Q8NFI4 369 aaPredicted RBP14.65□□□□□ -0.06
BRCC3-201ENST00000330045 WDR36Q8NI36 951 aaKnown RBP14.65□□□□□ -0.06
BRCC3-201ENST00000330045 NLNQ9BYT8 704 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 MIR1-1HGQ9H1L0 117 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 CERS4Q9HA82 394 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 ITM2CQ9NQX7 267 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 CFL2Q9Y281 166 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 PCDHGB6Q9Y5F9 930 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 SNX8Q9Y5X2 465 aa14.65□□□□□ -0.06
BRCC3-201ENST00000330045 KRR1Q13601 381 aaKnown RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 SPANXN2Q5MJ10 180 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 C9orf50Q5SZB4 431 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 DESI1Q6ICB0 168 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 ZNF770Q6IQ21 691 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 TRMT11Q7Z4G4 463 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms