RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RBBP4Q09028 425 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 DEPDC1Q5TB30 811 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 C12orf40Q86WS4 652 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 ARMC8Q8IUR7 673 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 TAAR2Q9P1P5 351 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 TMCC3Q9ULS5 477 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 IFT52Q9Y366 437 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 RGS5O15539 181 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 CHMP24386 653 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 IRS1P35568 1242 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 TUBA1BP68363 451 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 DHCR24Q15392 516 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 STEAP3Q658P3 488 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 FAM83HQ6ZRV2 1179 aaPredicted RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 TUBA1AQ71U36 451 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 BCDIN3DQ7Z5W3 292 aaKnown RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 RBM45Q8IUH3 476 aaKnown RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 HORMAD2Q8N7B1 307 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 KBTBD8Q8NFY9 601 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 MGLLQ99685 303 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 CLN6Q9NWW5 311 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 SAGE1Q9NXZ1 904 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 SCHIP1Q9P0W5 487 aaPredicted RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 AGAP5A6NIR3 686 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 DSCR3O14972 297 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 MRPS14O60783 128 aaKnown RBP13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 C6P13671 934 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 PSMB5P28074 263 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 XCR1P46094 333 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 KLHL17Q6TDP4 642 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 METTL4Q8N3J2 472 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 CELF5Q8N6W0 485 aaKnown RBP13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 OTUB2Q96DC9 234 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 CEP19Q96LK0 163 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 CDADC1Q9BWV3 514 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 NUAK2Q9H093 628 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 PCYT1BQ9Y5K3 369 aaPredicted RBP13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 SNX11Q9Y5W9 270 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 ANTXRLA6NF34 631 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 FOXE1O00358 373 aaPredicted RBP13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 KIAA0513O60268 411 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 UPK1BO75841 260 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 PRKAG1P54619 331 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 LYSMD2Q8IV50 215 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 ZNF547Q8IVP9 402 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 SLC34A3Q8N130 599 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 DENND6BQ8NEG7 585 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 CXorf40BQ96DE9 158 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 ABHD8Q96I13 439 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 MYNNQ9NPC7 610 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 TRPC4Q9UBN4 977 aa13.39□□□□□ -0.27
ATP2C1-201ENST00000328560 CXorf51AA0A1B0GTR3 108 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 H7BY64 318 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 CYP7B1O75881 506 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 KLHL18O94889 574 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PRNPP04156 253 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 ARAFP10398 606 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 TNNI3P19429 210 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 VIPR2P41587 438 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 CRISP1P54107 249 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 FRMPD2BQ6IN97 320 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 REEP3Q6NUK4 255 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 NCCRP1Q6ZVX7 275 aaPredicted RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 CYP4Z2PQ8N1L4 340 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 TMEM19Q96HH6 336 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PRAP1Q96NZ9 151 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 TPK1Q9H3S4 243 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PLCXD1Q9NUJ7 323 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 CUEDC1Q9NWM3 386 aaPredicted RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 QPCTLQ9NXS2 382 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PI15O43692 258 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 ADH1CP00326 375 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 SOD1P00441 154 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 ADRA2AP08913 450 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 EPCAMP16422 314 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PTX3P26022 381 aaPredicted RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 RPL3P39023 403 aaKnown RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 C1orf53Q5VUE5 145 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 WASH2PQ6VEQ5 465 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 SFTPA1Q8IWL2 248 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 LAS2Q8IYD9 372 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 SLC38A5Q8WUX1 472 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 XAGE5Q8WWM1 108 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 LRIG1Q96JA1 1093 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 CNPPD1Q9BV87 410 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 TMEM38AQ9H6F2 299 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 IL23AQ9NPF7 189 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 SLAMF7Q9NQ25 335 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 ZNF106Q9H2Y7 1883 aaKnown RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 CTDSP2O14595 271 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 ADH5P11766 374 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms