RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ZNF740Q8NDX6 193 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 RP9Q8TA86 221 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ZCCHC10Q8TBK6 192 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 MDM1Q8TC05 714 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SLC22A8Q8TCC7 542 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 AGR3Q8TD06 166 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ROPN1LQ96C74 230 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF317Q96PQ6 595 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 MTERF1Q99551 399 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SPRY4Q9C004 299 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SPRTNQ9H040 489 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF700Q9H0M5 742 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 RPF2Q9H7B2 306 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PPIEQ9UNP9 301 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 GMEB1Q9Y692 573 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CHD7Q9P2D1 2997 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 FOXO6A8MYZ6 492 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 H3BMH7 237 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PLOD2O00469 737 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PLPP1O14494 284 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ANGPT2O15123 496 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ACOX3O15254 700 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 PRAMEF2O60811 474 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ABCB7O75027 752 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ITGB2P05107 769 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 C8orf89P0DMQ9 161 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CREB1P16220 341 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 TCN2P20062 427 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CD22P20273 847 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ALAS2P22557 587 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 LIM2P55344 173 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SOX8P57073 446 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 OR4D2P58180 307 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CYP4F2P78329 520 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 RHDQ02161 417 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 VAC14Q08AM6 782 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 AIMP2Q13155 320 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ABRAXAS2Q15018 415 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 INAQ16352 499 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CPZQ66K79 652 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 MRPL14Q6P1L8 145 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ERICH5Q6P6B1 374 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 TMEM205Q6UW68 189 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 FAM198BQ6UWH4 519 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ZCCHC23Q6ZST2 131 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SLC29A4Q7RTT9 530 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ARHGEF39Q8N4T4 335 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 TP53INP1Q96A56 240 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 COQ8BQ96D53 544 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 RBM18Q96H35 190 aaKnown RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 F2RL3Q96RI0 385 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 CCNL2Q96S94 520 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 YIPF2Q9BWQ6 316 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 HOXD1Q9GZZ0 328 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 OR51B5Q9H339 312 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ARMC7Q9H6L4 198 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 ASCL3Q9NQ33 180 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 SDR39U1Q9NRG7 319 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-201ENST00000327908 OCIAD1Q9NX40 245 aa4.88□□□□□ -1.63
LRIT3-201ENST00000327908 FEZF1A0PJY2 475 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 E9PBE3 544 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 KIF1CO43896 1103 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LCMT2O60294 686 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 GMNNO75496 209 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SKAP2O75563 359 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 KLK1P06870 262 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CHRNGP07510 517 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 F7P08709 466 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DRD4P21917 467 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 KHKP50053 298 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 IDH3AP50213 366 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 FADDQ13158 208 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 EFR3AQ14156 821 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CEBPEQ15744 281 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DEFB134Q4QY38 66 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TBCELQ5QJ74 424 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ATAD3BQ5T9A4 648 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 IL23RQ5VWK5 629 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PWWP2BQ6NUJ5 590 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NDUFAF7Q7L592 441 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 VN1R5Q7Z5H4 357 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ZC3H7AQ8IWR0 971 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SLC5A8Q8N695 610 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PNPLA1Q8N8W4 532 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 FAM47BQ8NA70 645 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CT55Q8WUE5 264 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF354BQ96LW1 612 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SECISBP2Q96T21 854 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TMEM120AQ9BXJ8 343 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 RNF32Q9H0A6 362 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 AKTIPQ9H8T0 292 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 FAM60AQ9NP50 221 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SLC35C2Q9NQQ7 365 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 EXD2Q9NVH0 621 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ASB4Q9Y574 426 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PRAMEF33A0A0G2JMD5 474 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PRSS51A0A1B0GVH4 220 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DCDC2BA2VCK2 349 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TRABD2BA6NFA1 517 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SAGE2PA6NJ88 616 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms