RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 ZDHHC18Q9NUE0 388 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 MTRF1LQ9UGC7 380 aaKnown RBP13.15□□□□□ -0.3
RPAIN-201ENST00000327154 YARS2Q9Y2Z4 477 aaKnown RBP13.15□□□□□ -0.3
RPAIN-201ENST00000327154 CLCA3PQ9Y6N3 262 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 TMEM200CA6NKL6 621 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-201ENST00000327154 SH3BGRLO75368 114 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 OR2J2O76002 312 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 TGFB1P01137 390 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 SLC35E2BP0CK96 405 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 PCNAP12004 261 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 AGAP20933 346 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 CASP2P42575 452 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 MSH2P43246 934 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 SSR4P51571 173 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 GPR85P60893 370 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 STX4Q12846 297 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 RCN2Q14257 317 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 SLMAPQ14BN4 828 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 CDSNQ15517 529 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 ELAVL1Q15717 326 aaKnown RBP13.14□□□□□ -0.31
RPAIN-201ENST00000327154 TBCCQ15814 346 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 ZNF473Q8WTR7 871 aaKnown RBP13.14□□□□□ -0.31
RPAIN-201ENST00000327154 PTPMT1Q8WUK0 201 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-201ENST00000327154 KCNC2Q96PR1 638 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 MAPKAP1Q9BPZ7 522 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 NMRAL1Q9HBL8 299 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 LYRM4Q9HD34 91 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 VTI1BQ9UEU0 232 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 ERVK-11Q9UQG0 969 aa13.14□□□□□ -0.31
RPAIN-201ENST00000327154 LRBAP50851 2863 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 A0A1B0GTH9 108 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ESPNB1AK53 854 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 SUPT3HB4E1H0 165 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 UBXN8O00124 270 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 RTCAO00442 366 aaKnown RBP13.13□□□□□ -0.31
RPAIN-201ENST00000327154 PRRG2O14669 202 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 HS6ST1O60243 411 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ZNF500O60304 480 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-201ENST00000327154 LDB3O75112 727 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 SUPT3HO75486 399 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 PDE9AO76083 593 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 LTA4HP09960 611 aaKnown RBP13.13□□□□□ -0.31
RPAIN-201ENST00000327154 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 COX6B1P14854 86 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 TNNI3P19429 210 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ATP5A1P25705 553 aaKnown RBP13.13□□□□□ -0.31
RPAIN-201ENST00000327154 CRABP2P29373 138 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 STX2P32856 288 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ID2Q02363 134 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 MED27Q6P2C8 311 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 HSDL2Q6YN16 418 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ZNF793Q6ZN11 406 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 TBC1D1Q86TI0 1168 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ZNF321PQ8N8H1 164 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ACOT4Q8N9L9 421 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 SRFBP1Q8NEF9 429 aaKnown RBP13.13□□□□□ -0.31
RPAIN-201ENST00000327154 C16orf52Q8NHV5 167 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 DAZLQ92904 295 aaKnown RBP13.13□□□□□ -0.31
RPAIN-201ENST00000327154 UBE2E3Q969T4 207 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 NXNL1Q96CM4 212 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 RHOXF2Q9BQY4 288 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 TBCDQ9BTW9 1192 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 MS4A8Q9BY19 250 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 ROGDIQ9GZN7 287 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 TIMMDC1Q9NPL8 285 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 IGSF5Q9NSI5 407 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 NUDT4Q9NZJ9 180 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 MYOTQ9UBF9 498 aa13.13□□□□□ -0.31
RPAIN-201ENST00000327154 SYNDIG1LA6NDD5 238 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 A8MVJ9 347 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 E9PLN8 166 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 K7EPI3 171 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 WWP2O00308 870 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 SAP18O00422 153 aaKnown RBP13.12□□□□□ -0.31
RPAIN-201ENST00000327154 ADAM10O14672 748 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 CDC40O60508 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPAIN-201ENST00000327154 KERAO60938 352 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 OR6B1O95007 311 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 CLDN14O95500 239 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 PTGS2P35354 604 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 E2F2Q14209 437 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 CMPK2Q5EBM0 449 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 IL20RBQ6UXL0 311 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 CHSY3Q70JA7 882 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 LAS2Q8IYD9 372 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 ZFP62Q8NB50 900 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-201ENST00000327154 MORN4Q8NDC4 146 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 OR7G3Q8NG95 312 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 OR52N2Q8NGI0 321 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 ASB15Q8WXK1 588 aa13.12□□□□□ -0.31
RPAIN-201ENST00000327154 ANKRD9Q96BM1 317 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-201ENST00000327154 MTFMTQ96DP5 389 aaKnown RBP13.12□□□□□ -0.31
RPAIN-201ENST00000327154 MRRFQ96E11 262 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms