RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 SLC25A3Q00325 362 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 CFHR1Q03591 330 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 TARDBPQ13148 414 aaKnown RBP eCLIP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 UGT8Q16880 541 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 PRTGQ2VWP7 1150 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 MRM1Q6IN84 353 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 BNC2Q6ZN30 1099 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 ADAMTS18Q8TE60 1221 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 LRRC58Q96CX6 371 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 TEFMQ96QE5 360 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 GFM1Q96RP9 751 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 CADM1Q9BY67 442 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 LYRM4Q9HD34 91 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 LHX9Q9NQ69 397 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 IRAK4Q9NWZ3 460 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 SH3BP4Q9P0V3 963 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 KLHL3Q9UH77 587 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 BCAP29Q9UHQ4 241 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 BTNL2Q9UIR0 455 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 SERTAD3Q9UJW9 196 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 RALYQ9UKM9 306 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 MAN2B2Q9Y2E5 1009 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 MDC1Q14676 2089 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 GABRR3A8MPY1 467 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 RNASET2O00584 256 aaKnown RBP17.08■□□□□ 0.32
SYNE4-201ENST00000324444 KIF1CO43896 1103 aaKnown RBP17.08■□□□□ 0.32
SYNE4-201ENST00000324444 DNAJA2O60884 412 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 CIB2O75838 187 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 GBAP04062 536 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 DGKQP52824 942 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 CCL7P80098 99 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 MUM1Q2TAK8 710 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 TLDC1Q6P9B6 456 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 DHDDSQ86SQ9 333 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 BPHLQ86WA6 291 aaPredicted RBP17.08■□□□□ 0.32
SYNE4-201ENST00000324444 SCUBE1Q8IWY4 988 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 GPR135Q8IZ08 494 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 C7orf57Q8NEG2 295 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 OR8K5Q8NH50 307 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 GFM2Q969S9 779 aaKnown RBP17.08■□□□□ 0.32
SYNE4-201ENST00000324444 THTPAQ9BU02 230 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 SORBS1Q9BX66 1292 aaKnown RBP17.08■□□□□ 0.32
SYNE4-201ENST00000324444 GIMAP4Q9NUV9 329 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 TAS2R7Q9NYW3 318 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 MAP10Q9P2G4 905 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 DKK4Q9UBT3 224 aa17.08■□□□□ 0.32
SYNE4-201ENST00000324444 ADAMTS20P59510 1910 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 URB1O60287 2271 aaKnown RBP17.07■□□□□ 0.32
SYNE4-201ENST00000324444 A0A096LPI6 279 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 A0A1W2PQM1 296 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 BLACEA4D250 179 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 FITM1A5D6W6 292 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 RFXANKO14593 260 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 CASC3O15234 703 aaKnown RBP17.07■□□□□ 0.32
SYNE4-201ENST00000324444 P2RX6O15547 441 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 ANP32DO95626 131 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 AVPR1BP47901 424 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 GABRA4P48169 554 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 ARSFP54793 590 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 INSM1Q01101 510 aaPredicted RBP17.07■□□□□ 0.32
SYNE4-201ENST00000324444 SAMD4BQ5PRF9 694 aaKnown RBP17.07■□□□□ 0.32
SYNE4-201ENST00000324444 C6orf10Q5SRN2 563 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 RETREG3Q86VR2 466 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 C10orf67Q8IYJ2 551 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 TRIML2Q8N7C3 387 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 GTF2H4Q92759 462 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 MVB12AQ96EY5 273 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 GBP5Q96PP8 586 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 MACROD1Q9BQ69 325 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 CDC14AQ9UNH5 594 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 RAXQ9Y2V3 346 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 L3MBTL1Q9Y468 752 aa17.07■□□□□ 0.32
SYNE4-201ENST00000324444 C9JVG2 144 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 TMPRSS11DO60235 418 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 GALR3O60755 368 aaPredicted RBP17.06■□□□□ 0.32
SYNE4-201ENST00000324444 PRAMEF10O60809 474 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 PPIBP23284 216 aaKnown RBP17.06■□□□□ 0.32
SYNE4-201ENST00000324444 SPIDRQ14159 915 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 DEFB134Q4QY38 66 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 PAGE3Q5JUK9 113 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 SNAP47Q5SQN1 464 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 LRIF1Q5T3J3 769 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 NDUFAF5Q5TEU4 345 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 OR4F3Q6IEY1 312 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 SLC2A7Q6PXP3 512 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 ZNF793Q6ZN11 406 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 ARHGAP22Q7Z5H3 698 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 TICAM1Q8IUC6 712 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 CACTIN-AS1Q8N1I8 211 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 OR7A2PQ8NGA2 310 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 OR8J3Q8NGG0 315 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 ZFP28Q8NHY6 868 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 ZCCHC10Q8TBK6 192 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 NXPE2Q96DL1 559 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 CCDC115Q96NT0 180 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 NUDT22Q9BRQ3 303 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 GPATCH1Q9BRR8 931 aaKnown RBP17.06■□□□□ 0.32
SYNE4-201ENST00000324444 AICDAQ9GZX7 198 aa17.06■□□□□ 0.32
SYNE4-201ENST00000324444 CLCA2Q9UQC9 943 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms