RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 GOT2P00505 430 aaKnown RBP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 TROVE2P10155 538 aaKnown RBP eCLIP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 CYP2A6P11509 494 aaPredicted RBP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 TPH1P17752 444 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 MAXP61244 160 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF33BQ06732 778 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 BCL2L1Q07817 233 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 GXYLT1Q4G148 440 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 C1orf189Q5VU69 101 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 LIPMQ5VYY2 423 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 METTL21CQ5VZV1 264 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 LRRC8EQ6NSJ5 796 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 UGT3A1Q6NUS8 523 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 NEK10Q6ZWH5 1172 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 MRPL24Q96A35 216 aaKnown RBP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 FAM210AQ96ND0 272 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 FAM111AQ96PZ2 611 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 TSSK1BQ9BXA7 367 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 DRC3Q9H069 523 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 MRPL46Q9H2W6 279 aaKnown RBP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 KCNK13Q9HB14 408 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 NMRAL1Q9HBL8 299 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF629Q9UEG4 869 aaPredicted RBP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 SLC2A6Q9UGQ3 507 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 VWA7Q9Y334 891 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 SPO11Q9Y5K1 396 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 DNAH1Q9P2D7 4330 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 CCDC162PA2VCL2 907 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 F8W8V4 182 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 AP2A2O94973 939 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 SOD1P00441 154 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 LTA4HP09960 611 aaKnown RBP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 GABRA1P14867 456 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 PRDX6P30041 224 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 BNIP1Q12981 228 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 FAM83EQ2M2I3 478 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 CMPK2Q5EBM0 449 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 RNFT1Q5M7Z0 435 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 HECTD2Q5U5R9 776 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF470Q6ECI4 717 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 H3F3CQ6NXT2 135 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 DEF8Q6ZN54 512 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 GLT6D1Q7Z4J2 308 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 SNX20Q7Z614 316 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 NKAPQ8N5F7 415 aaKnown RBP6.19□□□□□ -1.42
CSTF3-201ENST00000323959 FAR2Q96K12 515 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 BIRC8Q96P09 236 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 TMEM237Q96Q45 408 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 SLC22A11Q9NSA0 550 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 UBP1Q9NZI7 540 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 VTI1BQ9UEU0 232 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 STK38LQ9Y2H1 464 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 DSCAMO60469 2012 aa6.19□□□□□ -1.42
CSTF3-201ENST00000323959 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 TTC36A6NLP5 189 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ANKRD65E5RJM6 399 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 H3BMH7 237 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 STX16-NPEPL1H3BU86 382 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF195O14628 629 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 STX16O14662 325 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 CPA3P15088 417 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 UGT1A1P22309 533 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 VSX2P58304 361 aaPredicted RBP6.18□□□□□ -1.42
CSTF3-201ENST00000323959 RPS4XP62701 263 aaKnown RBP6.18□□□□□ -1.42
CSTF3-201ENST00000323959 CDKL1Q00532 357 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 PCDH1Q08174 1060 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ITKQ08881 620 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 FOXL1Q12952 345 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 BMPR2Q13873 1038 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 FASTKD1Q53R41 847 aaKnown RBP6.18□□□□□ -1.42
CSTF3-201ENST00000323959 RTL6Q6ICC9 239 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 TRPM8Q7Z2W7 1104 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 PIWIL4Q7Z3Z4 852 aaKnown RBP6.18□□□□□ -1.42
CSTF3-201ENST00000323959 GALNTL5Q7Z4T8 443 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ZSWIM9Q86XI8 627 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 NUDCD3Q8IVD9 361 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ANKRD42Q8N9B4 389 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 C16orf52Q8NHV5 167 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 UBTD2Q8WUN7 234 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ITFG2Q969R8 447 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ART5Q96L15 291 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 SORT1Q99523 831 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 TTC1Q99614 292 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 KLHL1Q9NR64 748 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 FGFR1OP2Q9NVK5 253 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 TMEM216Q9P0N5 145 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 MED16Q9Y2X0 877 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ACTL7AQ9Y615 435 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 CFAP73A6NFT4 308 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 TRIM13O60858 407 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 KCNJ13O60928 360 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 OR2B3O76000 313 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 HAUS5O94927 633 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 FGF4P08620 206 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 VIMP08670 466 aaKnown RBP6.18□□□□□ -1.42
CSTF3-201ENST00000323959 CCDC166P0CW27 439 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 IGHV4-31P0DP07 118 aa6.18□□□□□ -1.42
CSTF3-201ENST00000323959 POLR2CP19387 275 aaPredicted RBP6.18□□□□□ -1.42
CSTF3-201ENST00000323959 ATP5F1P24539 256 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms