RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DNAJB9Q9UBS3 223 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 MUTYHQ9UIF7 546 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CES1P1Q9UKY3 287 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 A0A0G2JN53 185 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 MYO1GB0I1T2 1018 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 BCAT2O15382 392 aaPredicted RBP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 TPST1O60507 370 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 NTRK1P04629 796 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CHI3L1P36222 383 aaPredicted RBP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CLCN2P51788 898 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 C21orf59P57076 290 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 FOLH1Q04609 750 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 ZNF630Q2M218 657 aaPredicted RBP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 SLC48A1Q6P1K1 146 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CCDC80Q76M96 950 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 ABHD13Q7L211 337 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 C11orf74Q86VG3 221 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 TMEFF1Q8IYR6 380 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 KCT2Q8NC54 265 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 EXOSC8Q96B26 276 aaKnown RBP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 TBC1D20Q96BZ9 403 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CIB1Q99828 191 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 OSBPL11Q9BXB4 747 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 PHF11Q9UIL8 331 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 UTS2RQ9UKP6 389 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 ATG4BQ9Y4P1 393 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CSNK1G3Q9Y6M4 447 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 A0A0J9YVX5 310 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 H0YGG7 62 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 ACOX3O15254 700 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 UBXN7O94888 489 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 RASAL1O95294 804 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 CERS1P27544 350 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 NTSP30990 170 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 CRATP43155 626 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 RAB8AP61006 207 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 ARF3P61204 181 aaPredicted RBP16.9■□□□□ 0.3
RAB39A-201ENST00000320578 BTN3A2P78410 334 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 TMEM64Q6YI46 380 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 WDR5BQ86VZ2 330 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 MARVELD2Q8N4S9 558 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 PNPT1Q8TCS8 783 aaKnown RBP16.9■□□□□ 0.3
RAB39A-201ENST00000320578 AMDHD1Q96NU7 426 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 SLC29A1Q99808 456 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 SIRT3Q9NTG7 399 aaPredicted RBP16.9■□□□□ 0.3
RAB39A-201ENST00000320578 THUMPD1Q9NXG2 353 aaKnown RBP16.9■□□□□ 0.3
RAB39A-201ENST00000320578 MS4A12Q9NXJ0 267 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 PSME2Q9UL46 239 aa16.9■□□□□ 0.3
RAB39A-201ENST00000320578 PRUNE2Q8WUY3 3088 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 RNF103-CHMP3A0A140T963 221 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 PIAS2O75928 621 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 AIFM1O95831 613 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 ZNF888P0CJ79 500 aaPredicted RBP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 CKMT2P17540 419 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 EPHA4P54764 986 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 MAZP56270 477 aaKnown RBP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 EEF1A2Q05639 463 aaKnown RBP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 MYBPC3Q14896 1274 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 NKG7Q16617 165 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 EPHX4Q8IUS5 362 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 SAMD14Q8IZD0 417 aaPredicted RBP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 FAM86B1Q8N7N1 296 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 GATA6Q92908 595 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 FCRL4Q96PJ5 515 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 CHRNA10Q9GZZ6 450 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 RAB33BQ9H082 229 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 NTN4Q9HB63 628 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 LYRM4Q9HD34 91 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 PRMT8Q9NR22 394 aaPredicted RBP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 SLC22A7Q9Y694 548 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 FAM149AA5PLN7 773 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 P2RX6O15547 441 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 STATHP02808 62 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 SEMG1P04279 462 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 NUDT7P0C024 238 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 ARAFP10398 606 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 CAPZBP47756 277 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 TXNL4AP83876 142 aaKnown RBP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 BIRC2Q13490 618 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 COX20Q5RI15 118 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 TMEM214Q6NUQ4 689 aaKnown RBP16.89■□□□□ 0.29
RAB39A-201ENST00000320578 RNF130Q86XS8 419 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 CLEC4FQ8N1N0 589 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 GALNT4Q8N4A0 578 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 SFXN5Q8TD22 340 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 MOAP1Q96BY2 351 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 GLIPR2Q9H4G4 154 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 BATF3Q9NR55 127 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 EPHA6Q9UF33 1036 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 OAZ3Q9UMX2 235 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 ZNF451Q9Y4E5 1061 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 V9GYQ6 96 aa16.89■□□□□ 0.29
RAB39A-201ENST00000320578 SNRNP200O75643 2136 aaKnown RBP16.88■□□□□ 0.29
RAB39A-201ENST00000320578 LOC105369274A0A096LPK9 316 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 LOC102723532A0A0G2JNH3 316 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 C7orf72A4D263 438 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 UPK1AO00322 258 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 TXNDC9O14530 226 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms