RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SYTL3Q4VX76 610 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 ZMAT1Q5H9K5 638 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 C12orf73Q69YU5 71 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 HSD11B1LQ7Z5J1 315 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 LAX1Q8IWV1 398 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 RAVER1Q8IY67 606 aaKnown RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 TAGAPQ8N103 731 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 ASCC1Q8N9N2 400 aaKnown RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 IL17RCQ8NAC3 791 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 OR5AK3PQ8NH89 298 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 VANGL1Q8TAA9 524 aaPredicted RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 TIFAQ96CG3 184 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 MTERF3Q96E29 417 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 GDF15Q99988 308 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 DDX28Q9NUL7 540 aaKnown RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 RHCGQ9UBD6 479 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 CLEC2DQ9UHP7 191 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 TRBV4-1A0A0J9YWV2 114 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 CENPXA8MT69 81 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 CTSAP10619 480 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 MAPK9P45984 424 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 LIM2P55344 173 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 PRSS53Q2L4Q9 553 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 UNC5DQ6UXZ4 953 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 TMPRSS11BQ86T26 416 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 GATAD2AQ86YP4 633 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 NANOGP1Q8N7R0 232 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 SIMC1Q8NDZ2 872 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 TMEM159Q96B96 161 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 IL4I1Q96RQ9 567 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 PHOX2BQ99453 314 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 MND1Q9BWT6 205 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 TMEM121BQ9BXQ6 578 aaPredicted RBP18.22■□□□□ 0.51
RTN4-201ENST00000317610 UCK2Q9BZX2 261 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 MARCH7Q9H992 704 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 DMRT3Q9NQL9 472 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 TSPAN6O43657 245 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 TPST2O60704 377 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 CYP7B1O75881 506 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 CKMT1AP12532 417 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 POU1F1P28069 291 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 PREPP48147 710 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 EPHB3P54753 998 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 POLR2LP62875 67 aaKnown RBP18.22■□□□□ 0.51
RTN4-201ENST00000317610 C2orf80Q0P641 193 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 DUSP7Q16829 419 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 ZNF648Q5T619 568 aaPredicted RBP18.22■□□□□ 0.51
RTN4-201ENST00000317610 VASH1Q7L8A9 365 aaPredicted RBP18.22■□□□□ 0.51
RTN4-201ENST00000317610 NANOGNBQ7Z5D8 188 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 TRAM1L1Q8N609 369 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 WDR48Q8TAF3 677 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 C11orf16Q9NQ32 467 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 CFAP97Q9P2B7 532 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 GULP1Q9UBP9 304 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 FAM8A1Q9UBU6 413 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 CMAHPQ9Y471 501 aa18.22■□□□□ 0.51
RTN4-201ENST00000317610 A0A1W2PQ45 241 aaPredicted RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 A0A1W2PQY0 241 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 MEIOCA2RUB1 952 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 FAM227AF5H4B4 570 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 PRRG1O14668 218 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 SEC14L5O43304 696 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 HBQ1P09105 142 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 SLC10A3P09131 477 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 MLLT11Q13015 90 aaPredicted RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 ASAH1Q13510 395 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 GLYR1Q49A26 553 aaPredicted RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 SLC34A3Q8N130 599 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 CHST14Q8NCH0 376 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 PROKR2Q8NFJ6 384 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 C17orf50Q8WW18 174 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 DHRS1Q96LJ7 313 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 SLC6A18Q96N87 628 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 NDEL1Q9GZM8 345 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 SNTG1Q9NSN8 517 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 NFKBIL1Q9UBC1 381 aaPredicted RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 MGAT4BQ9UQ53 548 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 RPL36Q9Y3U8 105 aaKnown RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 A0A1W2PQ09 198 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 ZNF197O14709 1029 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 LGI1O95970 557 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 GBAP04062 536 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 HLA-FP30511 346 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 VIPR1P32241 457 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 DSTNP60981 165 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 HYAL2Q12891 473 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 LARS2Q15031 903 aaKnown RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 LEXMQ3ZCV2 418 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 HENMT1Q5T8I9 393 aaKnown RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 REEP3Q6NUK4 255 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 LILRA3Q8N6C8 439 aaPredicted RBP18.21■□□□□ 0.51
RTN4-201ENST00000317610 PDXPQ96GD0 296 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 DNAJC27Q9NZQ0 273 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 INSL5Q9Y5Q6 135 aa18.21■□□□□ 0.51
RTN4-201ENST00000317610 DENND4CQ5VZ89 1909 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 A0A1W2PRB8 838 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 SOD2P04179 222 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 CTSCP53634 463 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 CAP1Q01518 475 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 ZNF91Q05481 1191 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms