RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DEPDC1Q5TB30 811 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 KHDRBS2Q5VWX1 349 aaKnown RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 LIPJQ5W064 366 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 SP5Q6BEB4 398 aaPredicted RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 GRHL2Q6ISB3 625 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 HSDL2Q6YN16 418 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 UBE3DQ7Z6J8 389 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 MYLK4Q86YV6 388 aaPredicted RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 RELL1Q8IUW5 271 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 GPALPP1Q8IXQ4 340 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 GHDCQ8N2G8 530 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 ZNF808Q8N4W9 903 aaPredicted RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 MORN4Q8NDC4 146 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 MNS1Q8NEH6 495 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 OR14A16Q8NHC5 309 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 REPS1Q96D71 796 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 C16orf45Q96MC5 204 aaPredicted RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 CSF3RQ99062 836 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 RUBCNLQ9H714 662 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 ACTR8Q9H981 624 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 SH3BGRL2Q9UJC5 107 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 ENTPD4Q9Y227 616 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 CLDN16Q9Y5I7 305 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 IKBKGQ9Y6K9 419 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 DIDO1Q9BTC0 2240 aaKnown RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 CPAMD8Q8IZJ3 1885 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 PRSS44E7EML9 344 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 UGDHO60701 494 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 SCELO95171 688 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 MTHFD2P13995 350 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 CPN2P22792 545 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 PPP2R1BP30154 601 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 PIK3CGP48736 1102 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 SERPINB8P50452 374 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 RAP1GDS1P52306 607 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 BIKQ13323 160 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 SETDB1Q15047 1291 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 OR4C11Q6IEV9 310 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 METTL2BQ6P1Q9 378 aaKnown RBP16.54■□□□□ 0.24
TPM1-203ENST00000317516 XKRXQ6PP77 449 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 MRGPRGQ86SM5 289 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 CENPLQ8N0S6 344 aaPredicted RBP16.54■□□□□ 0.24
TPM1-203ENST00000317516 CYP4Z2PQ8N1L4 340 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 RGMAQ96B86 450 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 CCDC120Q96HB5 630 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 MAPKAP1Q9BPZ7 522 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 TSPAN10Q9H1Z9 355 aaPredicted RBP16.54■□□□□ 0.24
TPM1-203ENST00000317516 ACSS3Q9H6R3 686 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 TIMMDC1Q9NPL8 285 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 ERVK-11Q9UQG0 969 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 ZNF835Q9Y2P0 537 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 TSC22D4Q9Y3Q8 395 aa16.54■□□□□ 0.24
TPM1-203ENST00000317516 KLF2Q9Y5W3 355 aaPredicted RBP16.54■□□□□ 0.24
TPM1-203ENST00000317516 HMX2A2RU54 273 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 A8MVJ9 347 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 TGFBR3LH3BV60 316 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 HNRNPRO43390 633 aaKnown RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 DYRK3O43781 588 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 WISP2O76076 250 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 INHBAP08476 426 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 COX7A2P14406 83 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 ABOP16442 354 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 PTX3P26022 381 aaPredicted RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 TLX1P31314 330 aaPredicted RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 SMSP52788 366 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 ARFIP1P53367 373 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 IRF9Q00978 393 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 DDX39BQ13838 428 aaKnown RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 PCBP2Q15366 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
TPM1-203ENST00000317516 C3AR1Q16581 482 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 ZNF793Q6ZN11 406 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 BNC2Q6ZN30 1099 aaPredicted RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 Q6ZPB1 254 aaPredicted RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 TAOK1Q7L7X3 1001 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 ZNF227Q86WZ6 799 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 SIAH3Q8IW03 269 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 EID3Q8N140 333 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 MMGT1Q8N4V1 131 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 CPSF7Q8N684 471 aaKnown RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 OR5L2Q8NGL0 311 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 HUS1BQ8NHY5 278 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 PTPMT1Q8WUK0 201 aaPredicted RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 ITLN2Q8WWU7 325 aaPredicted RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 ZNF592Q92610 1267 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 VPS11Q9H270 941 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 OR51B5Q9H339 312 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 HPF1Q9NWY4 346 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 NINJ2Q9NZG7 142 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 MYOTQ9UBF9 498 aa16.53■□□□□ 0.24
TPM1-203ENST00000317516 ZNF223Q9UK11 482 aaPredicted RBP16.53■□□□□ 0.24
TPM1-203ENST00000317516 C17orf105B2RV13 164 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 RTCAO00442 366 aaKnown RBP16.52■□□□□ 0.24
TPM1-203ENST00000317516 PEX1O43933 1283 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 KLK8O60259 260 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 LDB3O75112 727 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 SH3BGRLO75368 114 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 TUBB4AP04350 444 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 RBP1P09455 135 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 MEOX1P50221 254 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 SERPINB9P50453 376 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms