RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 GPN2Q9H9Y4 310 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 PHPT1Q9NRX4 125 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 MRGBPQ9NV56 204 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 SPATA6Q9NWH7 488 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 TMEM9Q9P0T7 183 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF639Q9UID6 485 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 TMEFF2Q9UIK5 374 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 EXO1Q9UQ84 846 aaKnown RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ELOVL7A1L3X0 281 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 H0YIV9 168 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 CLIC1O00299 241 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 EIF3FO00303 357 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 CYP7B1O75881 506 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 C9P02748 559 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 HSMCR30P0CW71 290 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 TRIM23P36406 574 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ACTR1BP42025 376 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 CRATP43155 626 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 PPM1FP49593 454 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ACTR1AP61163 376 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 HBA1P69905 142 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 C2orf80Q0P641 193 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 GRIK2Q13002 908 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 GAB1Q13480 694 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 COX20Q5RI15 118 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 CPTPQ5TA50 214 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 TTC23Q5W5X9 447 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 GPR153Q6NV75 609 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ADAMTSL4Q6UY14 1074 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 OLIG3Q7RTU3 272 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 P2RY8Q86VZ1 359 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 PROSER1Q86XN7 944 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 DCP2Q8IU60 420 aaKnown RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 LRRC56Q8IYG6 542 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 MICU2Q8IYU8 434 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 TMEM132CQ8N3T6 1108 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 MFSD4AQ8N468 514 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 FBXL6Q8N531 539 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 PAPD5Q8NDF8 572 aaKnown RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 OR10G6Q8NH81 332 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 OR1E3Q8WZA6 343 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 HDAC2Q92769 488 aaKnown RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 HHIPQ96QV1 700 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 C17orf62Q9BQA9 187 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 C1QTNF2Q9BXJ5 285 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 MROQ9BYG7 248 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 EHD1Q9H4M9 534 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 C6orf106Q9H6K1 298 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 RUBCNLQ9H714 662 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 BOLA1Q9Y3E2 137 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 MAP4K5Q9Y4K4 846 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 PCDHGA10Q9Y5H3 936 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 IGKV1-8A0A0C4DH67 115 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 A0A1W2PS29 197 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ANKDD1BA6NHY2 528 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 KMOO15229 486 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 PLRG1O43660 514 aaKnown RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 FKBP9O95302 570 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 C6orf47O95873 294 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 TBX6O95947 436 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 IL3P08700 152 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 UMPSP11172 480 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 TGM1P22735 817 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 PTPN6P29350 595 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 CD40LGP29965 261 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 WNT3P56703 355 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 RAB8AP61006 207 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 RPS3AP61247 264 aaKnown RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 FOXM1Q08050 763 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF750Q32MQ0 723 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 UAP1L1Q3KQV9 507 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 CCDC92Q53HC0 331 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 FKBP9P1Q75LS8 142 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 NANOGNBQ7Z5D8 188 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 C17orf64Q86WR6 236 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 HORMAD1Q86X24 394 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 DCUN1D3Q8IWE4 304 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 EID3Q8N140 333 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 DPP10Q8N608 796 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 OR52E1Q8NGJ3 308 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 FAM3CQ92520 227 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF514Q96K75 400 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 BMFQ96LC9 184 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 TUBA1CQ9BQE3 449 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 DUSP26Q9BV47 211 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 TRIT1Q9H3H1 467 aaKnown RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 DPEP2Q9H4A9 486 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 KLHL31Q9H511 634 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 C14orf119Q9NWQ9 140 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 SIRT5Q9NXA8 310 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 NFKBIL1Q9UBC1 381 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 DNAJB9Q9UBS3 223 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ATG2AQ2TAZ0 1938 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 C17orf113A0A1B0GUU1 675 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 PRSS38A1L453 326 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 TRIM64BA6NI03 449 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ISM1B1AKI9 464 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 CREG1O75629 220 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 C8orf89P0DMQ9 161 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 CD36P16671 472 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms