RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TADA1Q96BN2 335 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 SIPA1Q96FS4 1042 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 SH3BP4Q9P0V3 963 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 FZD4Q9ULV1 537 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 SNX11Q9Y5W9 270 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 RPS10-NUDT3A0A1W2PQS6 291 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 C2orf81A6NN90 581 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 PPM1BO75688 479 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 ACPPP15309 386 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 OR1G1P47890 313 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 PCDH1Q08174 1060 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 RIN1Q13671 783 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 C1DQ13901 141 aaKnown RBP17.26■□□□□ 0.35
SPSB4-201ENST00000310546 ZNF628Q5EBL2 1059 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 GPR139Q6DWJ6 353 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 USP30Q70CQ3 517 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 ZYG11BQ9C0D3 744 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 TPT1P8Q9HAU6 139 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 ZFP64Q9NPA5 681 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 TLR8Q9NR97 1041 aaKnown RBP17.26■□□□□ 0.35
SPSB4-201ENST00000310546 ABCC13Q9NSE7 274 aa17.26■□□□□ 0.35
SPSB4-201ENST00000310546 ANKRD36A6QL64 1941 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 KCNC3Q14003 757 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 CHMP1BQ7LBR1 199 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 AQP11Q8NBQ7 271 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 OR10Z1Q8NGY1 313 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 KLHL6Q8WZ60 621 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 ST8SIA4Q92187 359 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 RBPMSQ93062 196 aaKnown RBP17.25■□□□□ 0.35
SPSB4-201ENST00000310546 KIAA1143Q96AT1 154 aaPredicted RBP17.25■□□□□ 0.35
SPSB4-201ENST00000310546 KATNB1Q9BVA0 655 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 MND1Q9BWT6 205 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 RHCGQ9UBD6 479 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 ZMAT5Q9UDW3 170 aaKnown RBP17.25■□□□□ 0.35
SPSB4-201ENST00000310546 CDH10Q9Y6N8 788 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 AKAP8O43823 692 aaKnown RBP17.25■□□□□ 0.35
SPSB4-201ENST00000310546 LGI1O95970 557 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 IFNA7P01567 189 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 RRASP10301 218 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 EPB42P16452 691 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 AGFG1P52594 562 aaKnown RBP17.25■□□□□ 0.35
SPSB4-201ENST00000310546 HDDC2Q7Z4H3 204 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 GPAT4Q86UL3 456 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 CARNMT1Q8N4J0 409 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 ZNF655Q8N720 491 aaPredicted RBP17.25■□□□□ 0.35
SPSB4-201ENST00000310546 APIPQ96GX9 242 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 KCTD7Q96MP8 289 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 TNFRSF10DQ9UBN6 386 aa17.25■□□□□ 0.35
SPSB4-201ENST00000310546 RAMP2O60895 175 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 KELP23276 732 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 ALDH9A1P49189 494 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 DSTNP60981 165 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 ARHGEF7Q14155 803 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 LEXMQ3ZCV2 418 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 GPALPP1Q8IXQ4 340 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 DBF4BQ8NFT6 615 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 RNF208Q9H0X6 261 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 RANBP3Q9H6Z4 567 aaPredicted RBP17.24■□□□□ 0.35
SPSB4-201ENST00000310546 PPP1R3EQ9H7J1 279 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 ASIC5Q9NY37 505 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 UBQLN2Q9UHD9 624 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 TRAV6A0A075B6T7 132 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 A0A0U1RQF3 1178 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 CLCNKAP51800 687 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 CLVS2Q5SYC1 327 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 ASB18Q6ZVZ8 466 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 CPA6Q8N4T0 437 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 AP3S1Q92572 193 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 TMEM43Q9BTV4 400 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 HDHD2Q9H0R4 259 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 PCDHGB7Q9Y5F8 929 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 SPIN1Q9Y657 262 aaPredicted RBP17.24■□□□□ 0.35
SPSB4-201ENST00000310546 TMEM229AB2RXF0 380 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 FAM227AF5H4B4 570 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 DPM1O60762 260 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 FKTNO75072 461 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 SOX14O95416 240 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 EPOP01588 193 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 FCER2P06734 321 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 CLCN4P51793 760 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 CTBP2P56545 445 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 RPL6Q02878 288 aaKnown RBP17.24■□□□□ 0.35
SPSB4-201ENST00000310546 SHEQ5VZ18 495 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 LRRTM3Q86VH5 581 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 GHDCQ8N2G8 530 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 ST8SIA2Q92186 375 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 TCF25Q9BQ70 676 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 CIPCQ9C0C6 399 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 CSNK1G1Q9HCP0 422 aa17.24■□□□□ 0.35
SPSB4-201ENST00000310546 PRRC2BQ5JSZ5 2229 aaKnown RBP17.23■□□□□ 0.35
SPSB4-201ENST00000310546 ATG13O75143 517 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 PRPS2P11908 318 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 RHOQP17081 205 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 AVPR1BP47901 424 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 SELENOWP63302 87 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 C2orf80Q0P641 193 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 VEZF1Q14119 521 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 UPP1Q16831 310 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms