RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 SLC28A2O43868 658 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 CBSLP0DN79 551 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SRCP12931 536 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 HOXB6P17509 224 aaKnown RBP14.16□□□□□ -0.14
RUNX3-201ENST00000308873 MYL12AP19105 171 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SDHBP21912 280 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 CBSP35520 551 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 HOXC5Q00444 222 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 CNTN1Q12860 1018 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 PPP2R2DQ66LE6 453 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 B3GLCTQ6Y288 498 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 RRM2BQ7LG56 351 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 PLPP6Q8IY26 295 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 L3MBTL4Q8NA19 623 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 FAM46DQ8NEK8 389 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ASIC5Q9NY37 505 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ITM2BQ9Y287 266 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 H3BQ06 376 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-201ENST00000308873 INPPL1O15357 1258 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 MYL9P24844 172 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 BUD31P41223 144 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-201ENST00000308873 MRPL58Q14197 206 aaKnown RBP14.16□□□□□ -0.14
RUNX3-201ENST00000308873 UBTD2Q8WUN7 234 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ARMC5Q96C12 935 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 RACGAP1Q9H0H5 632 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 HDHD2Q9H0R4 259 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 REEP4Q9H6H4 257 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 TBC1D24Q9ULP9 559 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SNX7Q9UNH6 387 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 GON4LQ3T8J9 2241 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 KCNE1BA0A087WTH5 132 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 FAM240BA0A1B0GVZ2 78 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 GLOD5A6NK44 160 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 NME6O75414 186 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-201ENST00000308873 IL1RNP18510 177 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SDC2P34741 201 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 PCGF2P35227 344 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SPINT3P49223 89 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 AP1S2P56377 157 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 DSTNP60981 165 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ABI3BPQ7Z7G0 1075 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 LHFPL3Q86UP9 236 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 IFNL1Q8IU54 200 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 KIAA1958Q8N8K9 716 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 NRTNQ99748 197 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 TMED9Q9BVK6 235 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 PRR14Q9BWN1 585 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ACER3Q9NUN7 267 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SLC25A13Q9UJS0 675 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 TMEM189-UBE2V1I3L0A0 370 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 GCM2O75603 506 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SLC16A1P53985 500 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ZNF763Q0D2J5 394 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 MTAPQ13126 283 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 LINC00299Q6ZSB3 139 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 HSD11B1LQ7Z5J1 315 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ATP6V1C2Q8NEY4 427 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 ZNF461Q8TAF7 563 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 TRMT61AQ96FX7 289 aaKnown RBP14.16□□□□□ -0.14
RUNX3-201ENST00000308873 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 OR2A14Q96R47 310 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 OR4K3Q96R72 315 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 GABARAPL3Q9BY60 117 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 UCK2Q9BZX2 261 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 KCNK12Q9HB15 430 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 NLKQ9UBE8 527 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 CMAHPQ9Y471 501 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 SNX11Q9Y5W9 270 aa14.16□□□□□ -0.14
RUNX3-201ENST00000308873 C1SP09871 688 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 SLC6A12P48065 614 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 ARSIQ5FYB1 569 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 LIPJQ5W064 366 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 ASB18Q6ZVZ8 466 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 NLRP8Q86W28 1048 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 SLC9A6Q92581 669 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 PRAMEF25A6NGN4 478 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 M0R3H8 397 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 NCR1O76036 304 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 CSTF2P33240 577 aaKnown RBP eCLIP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 TBPL1P62380 186 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 LSM11P83369 360 aaKnown RBP eCLIP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 TSEN54Q7Z6J9 526 aaKnown RBP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 UBQLNLQ8IYU4 475 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 POP5Q969H6 163 aaKnown RBP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 TMEM80Q96HE8 168 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 CLSTN3Q9BQT9 956 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 HDHD5Q9BXW7 423 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 C11orf54Q9H0W9 315 aaPredicted RBP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 ZNF334Q9HCZ1 680 aaPredicted RBP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 MRPL17Q9NRX2 175 aaKnown RBP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 CCDC59Q9P031 241 aaKnown RBP14.15□□□□□ -0.14
RUNX3-201ENST00000308873 PADI2Q9Y2J8 665 aa14.15□□□□□ -0.14
RUNX3-201ENST00000308873 CSO75390 466 aaKnown RBP14.15□□□□□ -0.15
RUNX3-201ENST00000308873 ERAL1O75616 437 aaKnown RBP14.15□□□□□ -0.15
RUNX3-201ENST00000308873 HTR2BP41595 481 aa14.15□□□□□ -0.15
RUNX3-201ENST00000308873 MAPK8P45983 427 aa14.15□□□□□ -0.15
RUNX3-201ENST00000308873 HEPACAMQ14CZ8 416 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms