RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ADAP2Q9NPF8 381 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 PNO1Q9NRX1 252 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 CPSF2Q9P2I0 782 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 XPR1Q9UBH6 696 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 VTI1BQ9UEU0 232 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 RNF11Q9Y3C5 154 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 TEX15Q9BXT5 2789 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 EML6Q6ZMW3 1958 aa18.48■□□□□ 0.55
PDZRN3-202ENST00000308537 NCOA6Q14686 2063 aaPredicted RBP18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 TRBV11-1A0A0K0K1C0 115 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 A0A1B0GTL3 188 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 MYOCOSA0A1B0GUC4 107 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 TRIM49D1C9J1S8 452 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 CLDN4O14493 209 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 LDB3O75112 727 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 TRAF3Q13114 568 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 SLC13A2Q13183 592 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 ELAVL1Q15717 326 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 FAM219BQ5XKK7 198 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 MRM1Q6IN84 353 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 GALNTL5Q7Z4T8 443 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 SUN3Q8TAQ9 357 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 NSUN5Q96P11 429 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 MTERF1Q99551 399 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 ROGDIQ9GZN7 287 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 IPPKQ9H8X2 491 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 COPS7BQ9H9Q2 264 aaPredicted RBP18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 KLHL1Q9NR64 748 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 LRFN1Q9P244 771 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 PCTPQ9UKL6 214 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 MRPS33Q9Y291 106 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 CACNA1DQ01668 2161 aa18.47■□□□□ 0.55
PDZRN3-202ENST00000308537 CELSR2Q9HCU4 2923 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 A1L4Q6 167 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 POC1B-GALNT4F8VUJ3 575 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 STX16-NPEPL1H3BU86 382 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 STX16O14662 325 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 LRRTM2O43300 516 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 NME2P1O60361 137 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 CRYABP02511 175 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 SP1P08047 785 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 FAM153BP0C7A2 387 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 NME2P22392 152 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 BSGP35613 385 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 HLCSP50747 726 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 CLCN2P51788 898 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 HNRNPH2P55795 449 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 RPS13P62277 151 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 TGM3Q08188 693 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 FAM153CQ494X1 144 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 RNFT1Q5M7Z0 435 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 OR4C11Q6IEV9 310 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 SLC25A25Q6KCM7 469 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 KLC3Q6P597 504 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 C16orf47Q6ZP98 133 aaPredicted RBP18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 CHSY3Q70JA7 882 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 CHERPQ8IWX8 916 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 ZCCHC7Q8N3Z6 543 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 ZNF321PQ8N8H1 164 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 RELTQ969Z4 430 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 VMP1Q96GC9 406 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 CDK15Q96Q40 435 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 ALOXE3Q9BYJ1 711 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 DEFB126Q9BYW3 111 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 ACTR8Q9H981 624 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 ADGRE2Q9UHX3 823 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 PPT2Q9UMR5 302 aa18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 TNPO3Q9Y5L0 923 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-202ENST00000308537 ZNF407Q9C0G0 2248 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 A0A087WUV0 522 aaPredicted RBP18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 FGF17O60258 216 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 KRT38O76015 456 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 UNC5CO95185 931 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 RPS17P08708 135 aaKnown RBP18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 RBP1P09455 135 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 COL6A2P12110 1019 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 CNTFP26441 200 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 EEF1DP29692 281 aaKnown RBP18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 ARFIP1P53367 373 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 DDX39BQ13838 428 aaKnown RBP18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 CPSF6Q16630 551 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 CEP112Q8N8E3 955 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 THAP3Q8WTV1 239 aaPredicted RBP18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 PHF21BQ96EK2 531 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 NTMT1Q9BV86 223 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 NOL11Q9H8H0 719 aaKnown RBP18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 PSD3Q9NYI0 1048 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 ATG4BQ9Y4P1 393 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 PCDHGA11Q9Y5H2 935 aa18.45■□□□□ 0.54
PDZRN3-202ENST00000308537 A0A0A6YYD5 115 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 PPP6CO00743 305 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 RIPK2O43353 540 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 TMPRSS11DO60235 418 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 ZNF354AO60765 605 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 EEDO75530 441 aaKnown RBP18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 PRKRAO75569 313 aaKnown RBP18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 SLC25A12O75746 678 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 CD46P15529 392 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 SSR2P43308 183 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 PIK3CGP48736 1102 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms