RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 OR5D16Q8NGK9 328 aa10.82□□□□□ -0.68
SCG2-201ENST00000305409 UBE2FQ969M7 185 aa10.82□□□□□ -0.68
SCG2-201ENST00000305409 TOE1Q96GM8 510 aaKnown RBP10.82□□□□□ -0.68
SCG2-201ENST00000305409 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
SCG2-201ENST00000305409 C7orf34Q96L11 122 aa10.82□□□□□ -0.68
SCG2-201ENST00000305409 GAS2L1Q99501 681 aaPredicted RBP10.82□□□□□ -0.68
SCG2-201ENST00000305409 NLNQ9BYT8 704 aa10.82□□□□□ -0.68
SCG2-201ENST00000305409 SRMSQ9H3Y6 488 aa10.82□□□□□ -0.68
SCG2-201ENST00000305409 CD320Q9NPF0 282 aa10.82□□□□□ -0.68
SCG2-201ENST00000305409 IFT80Q9P2H3 777 aaPredicted RBP10.82□□□□□ -0.68
SCG2-201ENST00000305409 RHCGQ9UBD6 479 aa10.82□□□□□ -0.68
SCG2-201ENST00000305409 APOBEC3BQ9UH17 382 aaKnown RBP10.82□□□□□ -0.68
SCG2-201ENST00000305409 LOC100130705A0A1B0GUX0 176 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 GSAPA4D1B5 854 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 DNAJB6O75190 326 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 SEMA3DO95025 777 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 BCHEP06276 602 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 C7P10643 843 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 PVRP15151 417 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 PCSK2P16519 638 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 MAGP20916 626 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 PPIBP23284 216 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 IGFBP5P24593 272 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 FEN1P39748 380 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 DGKEP52429 567 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 HNRNPFP52597 415 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 GANABQ14697 944 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 IQCCQ4KMZ1 466 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 TJAP1Q5JTD0 557 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 EOGTQ5NDL2 527 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 Q6ZPB1 254 aaPredicted RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 NRROSQ86YC3 692 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 TMEFF1Q8IYR6 380 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 ATG16L2Q8NAA4 619 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 CNIH3Q8TBE1 160 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 MS4A6EQ96DS6 147 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 GPR174Q9BXC1 333 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 RSPO3Q9BXY4 272 aaPredicted RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 C8orf33Q9H7E9 229 aaPredicted RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 ADPRHL2Q9NX46 363 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 THUMPD1Q9NXG2 353 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 CA14Q9ULX7 337 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 MMP17Q9ULZ9 603 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 MAPRE3Q9UPY8 281 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 HEMK1Q9Y5R4 338 aaPredicted RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 COLEC10Q9Y6Z7 277 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 SCN2AQ99250 2005 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 CCDC88CQ9P219 2028 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 A0A0A6YYD5 115 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 A0A0J9YVX5 310 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 A0A1W2PR48 441 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 LRRC72A6NJI9 287 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 LRRC74AQ0VAA2 488 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 RAPSNQ13702 412 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 DUSP7Q16829 419 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 TRIM40Q6P9F5 258 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 SHQ1Q6PI26 577 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 IKBIPQ70UQ0 350 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 C6orf120Q7Z4R8 191 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 APLFQ8IW19 511 aaPredicted RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 CCDC116Q8IYX3 515 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 ACOT4Q8N9L9 421 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 ZNF555Q8NEP9 628 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 ZCCHC10Q8TBK6 192 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 DGCR14Q96DF8 476 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 DOHHQ9BU89 302 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 RBM38Q9H0Z9 239 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 GLIPR2Q9H4G4 154 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 TM9SF3Q9HD45 589 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 SIRT3Q9NTG7 399 aaPredicted RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 DDX18Q9NVP1 670 aaKnown RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 NDUFAF4Q9P032 175 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 SCML1Q9UN30 329 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 CORO2BQ9UQ03 480 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.81□□□□□ -0.68
SCG2-201ENST00000305409 TSC22D4Q9Y3Q8 395 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 SPTBP11277 2137 aa10.81□□□□□ -0.68
SCG2-201ENST00000305409 SMIM31A0A1B0GVY4 71 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 TRBC2A0A5B9 178 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 ANKRD33BA6NCL7 494 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 PTGES3LE9PB15 166 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 H0YAE9 185 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 CLEC3AO75596 197 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 UQCRC2P22695 453 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 PCSK6P29122 969 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 GPC1P35052 558 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 RPL3P39023 403 aaKnown RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 KIAA1024LP59773 190 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 DSTNP60981 165 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 SELENOWP63302 87 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 CD47Q08722 323 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 GPR18Q14330 331 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 WDR53Q7Z5U6 358 aaPredicted RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 THAP5Q7Z6K1 395 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 HIPK1Q86Z02 1210 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 C8orf59Q8N0T1 100 aaPredicted RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 DDX31Q9H8H2 851 aaKnown RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 REEP1Q9H902 201 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 FBRSQ9HAH7 460 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 C8orf4Q9NR00 106 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms