RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NOL11Q9H8H0 719 aaKnown RBP24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 MS4A12Q9NXJ0 267 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 CLDN16Q9Y5I7 305 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 TGFBR3LH3BV60 316 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 IFNA16P05015 189 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 TPP2P29144 1249 aaPredicted RBP24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 MLF1P58340 268 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 SERTAD2Q14140 314 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 TIFABQ6ZNK6 161 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 ARMC10Q8N2F6 343 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 TMEM132CQ8N3T6 1108 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 TMEM178AQ8NBL3 297 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 PSD3Q9NYI0 1048 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 LRFN1Q9P244 771 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 CLCA3PQ9Y6N3 262 aa24.69■■□□□ 1.54
CDKN2A-201ENST00000304494 TRBV11-1A0A0K0K1C0 115 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 CPN2P22792 545 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 PPP2R1BP30154 601 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 CCNG1P51959 295 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 RPS13P62277 151 aaKnown RBP24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 SLAMF1Q13291 335 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 CUL3Q13618 768 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 SPINK14Q6IE38 97 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 LCA5Q86VQ0 697 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 RNF175Q8N4F7 328 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 DAZLQ92904 295 aaKnown RBP24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 SCMH1Q96GD3 660 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 CCDC77Q9BR77 488 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 NTMT1Q9BV86 223 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 ALOXE3Q9BYJ1 711 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 VTI1BQ9UEU0 232 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 FETUBQ9UGM5 382 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 PCTPQ9UKL6 214 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 RNF11Q9Y3C5 154 aa24.68■■□□□ 1.54
CDKN2A-201ENST00000304494 PTPN13Q12923 2485 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 FOXE1O00358 373 aaPredicted RBP24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 PLPP1O14494 284 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 OR7A17O14581 309 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 FAM153BP0C7A2 387 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 GP1BBP13224 206 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 GCAP28676 217 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 CYB561P49447 251 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 TDGF1P3P51864 188 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 ZRSR2Q15696 482 aaKnown RBP24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 FAM153CQ494X1 144 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 ZCCHC7Q8N3Z6 543 aaKnown RBP24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 EIF1ADQ8N9N8 165 aaKnown RBP24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 WDR20Q8TBZ3 569 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 NCLNQ969V3 563 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 TXLNGYQ9BZA5 131 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 KLHL1Q9NR64 748 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 PHF11Q9UIL8 331 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 ERRFI1Q9UJM3 462 aaPredicted RBP24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 FBXW2Q9UKT8 454 aa24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 USP9XQ93008 2570 aaPredicted RBP24.67■■□□□ 1.54
CDKN2A-201ENST00000304494 IQANK1A0A1B0GTG1 560 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 NEURL1O76050 574 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 SP1P08047 785 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 TRHRP34981 398 aaPredicted RBP24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 SLC29A2Q14542 456 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 C10orf62Q5T681 223 aaPredicted RBP24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 FAM98AQ8NCA5 519 aaKnown RBP24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 MORN4Q8NDC4 146 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 OR52B6Q8NGF0 335 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 OR14A16Q8NHC5 309 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 CDK15Q96Q40 435 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 TRIM45Q9H8W5 580 aaPredicted RBP24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 PPT2Q9UMR5 302 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 OSGIN2Q9Y236 505 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 DOPEY2Q9Y3R5 2298 aa24.66■■□□□ 1.54
CDKN2A-201ENST00000304494 LDB3O75112 727 aa24.65■■□□□ 1.54
CDKN2A-201ENST00000304494 TLX1P31314 330 aaPredicted RBP24.65■■□□□ 1.54
CDKN2A-201ENST00000304494 ST13P50502 369 aaKnown RBP24.65■■□□□ 1.54
CDKN2A-201ENST00000304494 HLCSP50747 726 aa24.65■■□□□ 1.54
CDKN2A-201ENST00000304494 GPR143P51810 404 aa24.65■■□□□ 1.54
CDKN2A-201ENST00000304494 GPR180Q86V85 440 aa24.65■■□□□ 1.54
CDKN2A-201ENST00000304494 SORBS1Q9BX66 1292 aaKnown RBP24.65■■□□□ 1.54
CDKN2A-201ENST00000304494 SLC25A12O75746 678 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 ZFAND5O76080 213 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 MLYCDO95822 493 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 TNNI3P19429 210 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 TAC1P20366 129 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 BIKQ13323 160 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 C4orf17Q53FE4 359 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 TTC19Q6DKK2 380 aaPredicted RBP24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 SLC25A25Q6KCM7 469 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 PTPMT1Q8WUK0 201 aaPredicted RBP24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 TANKQ92844 425 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 TMEM125Q96AQ2 219 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 NSUN5Q96P11 429 aaKnown RBP24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 SERPINI1Q99574 410 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 HES7Q9BYE0 225 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 RPF2Q9H7B2 306 aaKnown RBP24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 ZBTB26Q9HCK0 441 aa24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 LYARQ9NX58 379 aaKnown RBP24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 PSMC3IPQ9P2W1 217 aaPredicted RBP24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 ZNF223Q9UK11 482 aaPredicted RBP24.64■■□□□ 1.54
CDKN2A-201ENST00000304494 WIPF3A6NGB9 483 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 A8MT66 165 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 OTCP00480 354 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms