RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 CD244Q9BZW8 370 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 NFKBIL1Q9UBC1 381 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 POFUT2Q9Y2G5 429 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 NPPAP01160 153 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 BCHEP06276 602 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 JUPP14923 745 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 GNG2P59768 71 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 RPS21P63220 83 aaKnown RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 SCAPQ12770 1279 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 PTPRRQ15256 657 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 PRAMEF13Q5VWM6 474 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 CXXC5Q7LFL8 322 aaKnown RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 PEX5LQ8IYB4 626 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 GPR151Q8TDV0 419 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 UBE2FQ969M7 185 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 EGLN2Q96KS0 407 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 NELL2Q99435 816 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 BOCQ9BWV1 1114 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 ACSL6Q9UKU0 697 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 PCDHGB6Q9Y5F9 930 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 NINQ8N4C6 2090 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 CTDSP2O14595 271 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 PFKLP17858 780 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 CXCL12P48061 93 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 DUSP3P51452 185 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 RGS8P57771 180 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 ZNF33AQ06730 810 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 SF3B4Q15427 424 aaKnown RBP eCLIP12.91□□□□□ -0.34
HPS3-201ENST00000296051 FBXO43Q4G163 708 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 SLC9B2Q86UD5 537 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 FAM86B1Q8N7N1 296 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 SMPDL3AQ92484 453 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 MR1Q95460 341 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 SLCO4A1Q96BD0 722 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 FAM129BQ96TA1 746 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 C1QTNF1Q9BXJ1 281 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 APOBEC3BQ9UH17 382 aaKnown RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 IGLON5A6NGN9 336 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 PRAMEF11O60813 436 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 RNGTTO60942 597 aaKnown RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 ADAMTS4O75173 837 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 MYOGP15173 224 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 CASRP41180 1078 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 NOXRED1Q6NXP6 359 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 OR13F1Q8NGS4 319 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 JPH3Q8WXH2 748 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 CDCA3Q99618 268 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 RPL36Q9Y3U8 105 aaKnown RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 KLK1P06870 262 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 IDUAP35475 653 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 PIGAP37287 484 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 HTR2BP41595 481 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 TMEM115Q12893 351 aaPredicted RBP12.9□□□□□ -0.34
HPS3-201ENST00000296051 SHHQ15465 462 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 C22orf42Q6IC83 251 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 SUSD1Q6UWL2 747 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.9□□□□□ -0.34
HPS3-201ENST00000296051 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 HHIPQ96QV1 700 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 MCCC2Q9HCC0 563 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 HSFX1Q9UBD0 423 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 NDUFS4O43181 175 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 C6orf47O95873 294 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 ALPLP05186 524 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 PTGS2P35354 604 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 KCNJ5P48544 419 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 CCR8P51685 355 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 PLGLB1Q02325 96 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 RUNDC3AQ59EK9 446 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 CADM3Q8N126 398 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 FOXJ1Q92949 421 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 STRADBQ9C0K7 418 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 NLE1Q9NVX2 485 aaPredicted RBP12.9□□□□□ -0.34
HPS3-201ENST00000296051 GPRC5BQ9NZH0 403 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 PLAGL1Q9UM63 463 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 DHRS7Q9Y394 339 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 C12orf71A8MTZ7 269 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 MID1O15344 667 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 HPRP00739 348 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 CAPNS1P04632 268 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 FGF4P08620 206 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 TAS1R1Q7RTX1 841 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 ARHGAP12Q8IWW6 846 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 TCEAL8Q8IYN2 117 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 SLC5A8Q8N695 610 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 AVL9Q8NBF6 648 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 OR10H5Q8NGA6 315 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 UFD1Q92890 307 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 WDR92Q96MX6 357 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 PCDHGA3Q9Y5H0 932 aa12.9□□□□□ -0.34
HPS3-201ENST00000296051 PLGP00747 810 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms