RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 UFM1P61960 85 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 AP2B1P63010 937 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 OLR1P78380 273 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 IRX1P78414 480 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-201ENST00000293889 RUNX2Q13950 521 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 SLC9A5Q14940 896 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 MRM1Q6IN84 353 aaKnown RBP16.82■□□□□ 0.28
CCDC78-201ENST00000293889 TMEM126BQ8IUX1 230 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 METTL27Q8N6F8 245 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-201ENST00000293889 PMEPA1Q969W9 287 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 TM4SF18Q96CE8 201 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 CMTM5Q96DZ9 223 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 TEX37Q96LM6 180 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 ASB4Q9Y574 426 aa16.82■□□□□ 0.28
CCDC78-201ENST00000293889 PSMD12O00232 456 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 RDH16O75452 317 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 LRATO95237 230 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 NSA2O95478 260 aaKnown RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 CD1EP15812 388 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 CLDN8P56748 225 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 PAOXQ6QHF9 649 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 SHISA5Q8N114 240 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 KRTCAP2Q8N6L1 136 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 OR5T3Q8NGG3 340 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 OR9I1Q8NGQ6 314 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 PROKR1Q8TCW9 393 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 NUDT8Q8WV74 236 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 GFM2Q969S9 779 aaKnown RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 MAPKAP1Q9BPZ7 522 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 THTPAQ9BU02 230 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 MYNNQ9NPC7 610 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 TEX10Q9NXF1 929 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 NDOR1Q9UHB4 597 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 FBXW2Q9UKT8 454 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 DSCR3O14972 297 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 AKAP10O43572 662 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 SLC22A3O75751 556 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 JMJD7P0C870 316 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 ASMTP46597 345 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 AVPR1BP47901 424 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 MAPK10P53779 464 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 TRA2BP62995 288 aaKnown RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 KLF10Q13118 480 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 EIF3IQ13347 325 aaKnown RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 CAMK2BQ13554 666 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 RHBDD2Q6NTF9 364 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 NIPAL1Q6NVV3 410 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 FAM9CQ8IZT9 166 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 SLC38A9Q8NBW4 561 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 JADE3Q92613 823 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 MMABQ96EY8 250 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 NR1H4Q96RI1 486 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 ZNF184Q99676 751 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 DPY30Q9C005 99 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 LYARQ9NX58 379 aaKnown RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 ZIM2Q9NZV7 527 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 KCMF1Q9P0J7 381 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 PISDQ9UG56 409 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 SRPK3Q9UPE1 567 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 ATG4BQ9Y4P1 393 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 TMEM184BQ9Y519 407 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-201ENST00000293889 PCDHB3Q9Y5E6 796 aa16.81■□□□□ 0.28
CCDC78-201ENST00000293889 A0A1B0GX78 115 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 A0A1W2PR48 441 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 C9JVG2 144 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 PLD2O14939 933 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 NTRK1P04629 796 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 IL3P08700 152 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 LINGO3P0C6S8 592 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 PCSK2P16519 638 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 JAK1P23458 1154 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 IL12AP29459 219 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 ADSLP30566 484 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-201ENST00000293889 LIM2P55344 173 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 SKP1P63208 163 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 MC1RQ01726 317 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 C2orf80Q0P641 193 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 AGKQ53H12 422 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 C1orf189Q5VU69 101 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 FAM71E1Q6IPT2 247 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 GPR180Q86V85 440 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 FUNDC1Q8IVP5 155 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 RIMKLAQ8IXN7 391 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 MMP21Q8N119 569 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 CA13Q8N1Q1 262 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 TMEM132CQ8N3T6 1108 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 WDR36Q8NI36 951 aaKnown RBP16.8■□□□□ 0.28
CCDC78-201ENST00000293889 GATA6Q92908 595 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 MVB12AQ96EY5 273 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 NPLQ9BXD5 320 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-201ENST00000293889 SLC7A5P2Q9GIP4 190 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 LYRM4Q9HD34 91 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 MRGBPQ9NV56 204 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 CCDC167Q9P0B6 97 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 DAPP1Q9UN19 280 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 EXO1Q9UQ84 846 aaKnown RBP16.8■□□□□ 0.28
CCDC78-201ENST00000293889 NEUROG3Q9Y4Z2 214 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 MAU2Q9Y6X3 613 aa16.8■□□□□ 0.28
CCDC78-201ENST00000293889 CEP295Q9C0D2 2601 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms