RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 KIAA1614Q5VZ46 1190 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TBPL2Q6SJ96 375 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 METTL25Q8N6Q8 603 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 OR7G3Q8NG95 312 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 OR51A7Q8NH64 312 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 GEMIN6Q8WXD5 167 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 RLN3Q8WXF3 142 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 OR51I1Q9H343 314 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TUBA8Q9NY65 449 aaPredicted RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 STMN3Q9NZ72 180 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 DKK3Q9UBP4 350 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PHF24Q9UPV7 400 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 WBP11Q9Y2W2 641 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 RBBP6Q7Z6E9 1792 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 FAM170BA6NMN3 283 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 GABRR3A8MPY1 467 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 RHPN2P1A8MT19 583 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TAPBPO15533 448 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 KAT7O95251 611 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 C1GALT1C1LP0DN25 315 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TIMP2P16035 220 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZNF30P17039 623 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 MYL9P24844 172 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TIA1P31483 386 aaKnown RBP eCLIP4.58□□□□□ -1.683e-6■■■■□ 20.5
UBR1-201ENST00000290650 CSTF2P33240 577 aaKnown RBP eCLIP4.58□□□□□ -1.68
UBR1-201ENST00000290650 KDELR2P33947 212 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SHMT2P34897 504 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 STXBP1P61764 594 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 TUBB3Q13509 450 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PIN1Q13526 163 aaPredicted RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 C6orf141Q5SZD1 244 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 USP53Q70EK8 1073 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CLEC14AQ86T13 490 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PEX5LQ8IYB4 626 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZBTB8BQ8NAP8 495 aaPredicted RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 RAB2BQ8WUD1 216 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 FAM46AQ96IP4 442 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZNF354BQ96LW1 612 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 BIRC8Q96P09 236 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SEZ6LQ9BYH1 1024 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 KCMF1Q9P0J7 381 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 FNIP2Q9P278 1114 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SARDHQ9UL12 918 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CDH7Q9ULB5 785 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PLEKHM1Q9Y4G2 1056 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PCDHGB3Q9Y5G1 929 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 LRRC37AA6NMS7 1700 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ABCB7O75027 752 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 LDB3O75112 727 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 GGT1P19440 569 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CERS1P27544 350 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SSTR4P31391 388 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SOX3P41225 446 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TM4SF4P48230 202 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CRISP3P54108 245 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TXNL4AP83876 142 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 QPRTQ15274 297 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 VMACQ2NL98 169 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PLEKHS1Q5SXH7 462 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 B3GLCTQ6Y288 498 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 LAPTM4BQ86VI4 370 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ADGRG5Q8IZF4 528 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SLC39A11Q8N1S5 342 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 RASGEF1AQ8N9B8 481 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 OR4C6Q8NH72 309 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TTYH2Q9BSA4 534 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 FUNDC2Q9BWH2 189 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 WDR12Q9GZL7 423 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 HRASLS2Q9NWW9 162 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ADAM30Q9UKF2 790 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SVILO95425 2214 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 A0A096LPI6 279 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CD8B2A6NJW9 211 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SCAMP2O15127 329 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 TIMP1P01033 207 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CD8BP10966 210 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 JUPP14923 745 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PVRP15151 417 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 AKT2P31751 481 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 KHKP50053 298 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SMIM11AP58511 58 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 RBM48Q5RL73 367 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 GTF2IRD2BQ6EKJ0 949 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZNF773Q6PK81 442 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 RTL4Q6ZR62 310 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 C6orf120Q7Z4R8 191 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 BCDIN3DQ7Z5W3 292 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 GTF2IRD2Q86UP8 949 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ADAMTS19Q8TE59 1207 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 C16orf78Q8WTQ4 265 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 NARS2Q96I59 477 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 GPR174Q9BXC1 333 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 KCNH6Q9H252 994 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 POPDC3Q9HBV1 291 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CNIH4Q9P003 139 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 HCN3Q9P1Z3 774 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CRNNQ9UBG3 495 aaPredicted RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 TRPS1Q9UHF7 1281 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ANKRD36A6QL64 1941 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms