RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 MMP25Q9NPA2 562 aa23.56■■□□□ 1.36
PDF-201ENST00000288022 FARSBQ9NSD9 589 aaKnown RBP23.56■■□□□ 1.36
PDF-201ENST00000288022 TEKT2Q9UIF3 430 aa23.56■■□□□ 1.36
PDF-201ENST00000288022 PHF11Q9UIL8 331 aa23.56■■□□□ 1.36
PDF-201ENST00000288022 ZNF225Q9UK10 706 aa23.56■■□□□ 1.36
PDF-201ENST00000288022 PPT2Q9UMR5 302 aa23.56■■□□□ 1.36
PDF-201ENST00000288022 SAGE2PA6NJ88 616 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 CTNSO60931 367 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 EEDO75530 441 aaKnown RBP23.55■■□□□ 1.36
PDF-201ENST00000288022 PDYNP01213 254 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 HMOX2P30519 316 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 BSGP35613 385 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 ARG2P78540 354 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 ZNF33BQ06732 778 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 STX4Q12846 297 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 LCP2Q13094 533 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 PLEKHN1Q494U1 663 aaPredicted RBP23.55■■□□□ 1.36
PDF-201ENST00000288022 CFAP157Q5JU67 520 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 ABHD17BQ5VST6 288 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 CYP20A1Q6UW02 462 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 GPR180Q86V85 440 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 MS4A12Q9NXJ0 267 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 MID2Q9UJV3 735 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 SLC12A4Q9UP95 1085 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 CSAG2Q9Y5P2 127 aa23.55■■□□□ 1.36
PDF-201ENST00000288022 DYTNA2CJ06 578 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 TGFBR3LH3BV60 316 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 SORBS2O94875 1100 aaKnown RBP23.54■■□□□ 1.36
PDF-201ENST00000288022 SEMA3DO95025 777 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 KRT6AP02538 564 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 KRT6BP04259 564 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 IFNA16P05015 189 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 KRT6CP48668 564 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 NAGLUP54802 743 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 TAS2R50P59544 299 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 KRT71Q3SY84 523 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 FAM219BQ5XKK7 198 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 Q6ZS92 163 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 METTL6Q8TCB7 284 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 ZNF717Q9BY31 904 aaPredicted RBP23.54■■□□□ 1.36
PDF-201ENST00000288022 SLC29A3Q9BZD2 475 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 GSTO2Q9H4Y5 243 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 LYARQ9NX58 379 aaKnown RBP23.54■■□□□ 1.36
PDF-201ENST00000288022 PLA2G3Q9NZ20 509 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 AHSPQ9NZD4 102 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 MAP10Q9P2G4 905 aa23.54■■□□□ 1.36
PDF-201ENST00000288022 BSNQ9UPA5 3926 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 MYOCOSA0A1B0GUC4 107 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 BLACEA4D250 179 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 MANBAO00462 879 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 LDB3O75112 727 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 MYO1DO94832 1006 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 GBAP04062 536 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 PPP2R1BP30154 601 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 TLX1P31314 330 aaPredicted RBP23.53■■□□□ 1.36
PDF-201ENST00000288022 BUD31P41223 144 aaPredicted RBP23.53■■□□□ 1.36
PDF-201ENST00000288022 PKNOX1P55347 436 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 HNRNPH2P55795 449 aaKnown RBP23.53■■□□□ 1.36
PDF-201ENST00000288022 TCHHL1Q5QJ38 904 aaPredicted RBP23.53■■□□□ 1.36
PDF-201ENST00000288022 FCRLBQ6BAA4 426 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 BANPQ8N9N5 519 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 Q8NA96 180 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 SMC6Q96SB8 1091 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 HBEGFQ99075 208 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 TMEM109Q9BVC6 243 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 MRPL1Q9BYD6 325 aaKnown RBP23.53■■□□□ 1.36
PDF-201ENST00000288022 DDX31Q9H8H2 851 aaKnown RBP23.53■■□□□ 1.36
PDF-201ENST00000288022 MID1IP1Q9NPA3 183 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 MKS1Q9NXB0 559 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 STMN3Q9NZ72 180 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 ATG4BQ9Y4P1 393 aa23.53■■□□□ 1.36
PDF-201ENST00000288022 A0A0A6YYD5 115 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 SYNDIG1LA6NDD5 238 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 SPAG7O75391 227 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 F10P00742 488 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 FAM58BPP0C7Q3 252 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 DNAJB13P59910 316 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 NAA20P61599 178 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 TNFRSF17Q02223 184 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 ID2Q02363 134 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 IQCKQ8N0W5 287 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 KIF2BQ8N4N8 673 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 SLC5A8Q8N695 610 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 CPT1CQ8TCG5 803 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 ZNF354BQ96LW1 612 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 ALOXE3Q9BYJ1 711 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 RPF2Q9H7B2 306 aaKnown RBP23.52■■□□□ 1.36
PDF-201ENST00000288022 BRF2Q9HAW0 419 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 ADAP2Q9NPF8 381 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 OXSMQ9NWU1 459 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 NMRK1Q9NWW6 199 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 PLLPQ9Y342 182 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 CLDN16Q9Y5I7 305 aa23.52■■□□□ 1.36
PDF-201ENST00000288022 ARHGAP10A1A4S6 786 aa23.51■■□□□ 1.35
PDF-201ENST00000288022 TMPRSS11DO60235 418 aa23.51■■□□□ 1.35
PDF-201ENST00000288022 ENO1P06733 434 aaKnown RBP23.51■■□□□ 1.35
PDF-201ENST00000288022 KLK1P06870 262 aa23.51■■□□□ 1.35
PDF-201ENST00000288022 ZNF844Q08AG5 666 aa23.51■■□□□ 1.35
PDF-201ENST00000288022 TLR1Q15399 786 aa23.51■■□□□ 1.35
PDF-201ENST00000288022 IGFBP7Q16270 282 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms