RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 C3orf14Q9HBI5 128 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 DMRT3Q9NQL9 472 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 MUTYHQ9UIF7 546 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 TRAPPC4Q9Y296 219 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 KIF26AQ9ULI4 1882 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 MTCL1Q9Y4B5 1905 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 PDE4DIPQ5VU43 2346 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 A0A1W2PRB8 838 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC5A10A0PJK1 596 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF197O14709 1029 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 GRM6O15303 877 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 KLK1P06870 262 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 CYP2A6P11509 494 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF30P17039 623 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 TGM4P49221 684 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 PUM1Q14671 1186 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 SLX4IPQ5VYV7 408 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 FAM71E1Q6IPT2 247 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 WDR53Q7Z5U6 358 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 KRT73Q86Y46 540 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 LAX1Q8IWV1 398 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 LAS2Q8IYD9 372 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC34A3Q8N130 599 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 TRAM1L1Q8N609 369 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 OR2A12Q8NGT7 310 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 ASB15Q8WXK1 588 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 TP53INP1Q96A56 240 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC25A19Q9HC21 320 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 SNTG1Q9NSN8 517 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 DDX28Q9NUL7 540 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 NPAP1Q9NZP6 1156 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 LSM2Q9Y333 95 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 NOX1Q9Y5S8 564 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 DSPPQ9NZW4 1301 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 LINC00854A0A1B0GVQ3 168 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 A8MV72 311 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 LEFTY2O00292 366 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 CSO75390 466 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 MFN2O95140 757 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 SRPRAP08240 638 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 PIPP12273 146 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 POLR2EP19388 210 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 CSTF2P33240 577 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 DCDC1P59894 354 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 DSTNP60981 165 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 RPS26P62854 115 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 TRMT61AQ96FX7 289 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 FOPNLQ96NB1 174 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 SPNS1Q9H2V7 528 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 MYNNQ9NPC7 610 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 V9GYH0 126 aa12.63□□□□□ -0.39
SLC28A1-201ENST00000286749 PIPSLA2A3N6 862 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 ARRDC5A6NEK1 342 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 WWP2O00308 870 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 KRT75O95678 551 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 IL3P08700 152 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 NPPBP16860 134 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 TM4SF4P48230 202 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 RFX2P48378 723 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 ALDH9A1P49189 494 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC7A9P82251 487 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 RHAGQ02094 409 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 GPR50Q13585 617 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 E2F2Q14209 437 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 ARMC4Q5T2S8 1044 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 LHX8Q68G74 356 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF517Q6ZMY9 492 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 BTN2A2Q8WVV5 523 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 TIFAQ96CG3 184 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 TMEM169Q96HH4 297 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 SORBS1Q9BX66 1292 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 OR2B2Q9GZK3 357 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 CCDC177Q9NQR7 707 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 REV1Q9UBZ9 1251 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 DYRK1BQ9Y463 629 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 RPL3P39023 403 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 PRLHRP49683 370 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 PNLIPRP1P54315 467 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 CCL23P55773 120 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 SEC23BQ15437 767 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 SPHARQ15513 63 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 BAK1Q16611 211 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 BRAT1Q6PJG6 821 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 TMEM220Q6QAJ8 160 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 TMPRSS11AQ6ZMR5 421 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 DEFB128Q7Z7B8 93 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 TMEM25Q86YD3 366 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 KLHL6Q8WZ60 621 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 ZSCAN5AQ9BUG6 496 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 UCK2Q9BZX2 261 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC6A16Q9GZN6 736 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 ASAH2Q9NR71 780 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 GULP1Q9UBP9 304 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms