RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ARMC8Q8IUR7 673 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 LAS2Q8IYD9 372 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 NRSN1Q8IZ57 195 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 SLC5A8Q8N695 610 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 GEMIN6Q8WXD5 167 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 GGHQ92820 318 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 GLYATL1Q969I3 302 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 UBE2FQ969M7 185 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 MYOCQ99972 504 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 RIOK2Q9BVS4 552 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 ALOXE3Q9BYJ1 711 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF556Q9HAH1 456 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 C1GALT1Q9NS00 363 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 KLK4Q9Y5K2 254 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 FADS2P1A8MWK0 482 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 M0R082 166 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 PSMD11O00231 422 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 KRT75O95678 551 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 ALDH4A1P30038 563 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 PIK3CBP42338 1070 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 RPS13P62277 151 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 MESP2Q0VG99 397 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 KRR1Q13601 381 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 SCARB2Q14108 478 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 IKBIPQ70UQ0 350 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 KIAA0907Q7Z7F0 614 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 C1orf210Q8IVY1 113 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 RASGEF1AQ8N9B8 481 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 ATOH1Q92858 354 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 RPL3LQ92901 407 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 MAL2Q969L2 176 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 CLDN23Q96B33 292 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 KCNC2Q96PR1 638 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 MAPKAP1Q9BPZ7 522 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 LMAN1LQ9HAT1 526 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 MYNNQ9NPC7 610 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 GPATCH2Q9NW75 528 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 CNOT2Q9NZN8 540 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 EXO1Q9UQ84 846 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 AGAP5A6NIR3 686 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 EIF2S1P05198 315 aaKnown RBP12.33□□□□□ -0.44
C9orf3-201ENST00000277198 FURINP09958 794 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 HLA-EP13747 358 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 TIMP2P16035 220 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 C21orf33P30042 268 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-201ENST00000277198 NNMTP40261 264 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 ETV3P41162 512 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 LIMS1P48059 325 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 ALDH9A1P49189 494 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 PRIM2P49643 509 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 LIMK1P53667 647 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 HBA1P69905 142 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 EEF1A2Q05639 463 aaKnown RBP12.33□□□□□ -0.44
C9orf3-201ENST00000277198 PRKCDQ05655 676 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 TMEM115Q12893 351 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-201ENST00000277198 IRF3Q14653 427 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 GAB4Q2WGN9 574 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 TIMM50Q3ZCQ8 353 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 HIST2H2AA3Q6FI13 130 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 FAM92BQ6ZTR7 304 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 ADIPOR2Q86V24 386 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 TMEM25Q86YD3 366 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 SFTPA1Q8IWL2 248 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 CADM3Q8N126 398 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 NATD1Q8N6N6 113 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF675Q8TD23 568 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 NEIL2Q969S2 332 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 UBE2E3Q969T4 207 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 PPP1R16AQ96I34 528 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 PIP5K1AQ99755 562 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 SLC35A5Q9BS91 424 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 ITM2CQ9NQX7 267 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 TESMINQ9Y4I5 508 aa12.33□□□□□ -0.44
C9orf3-201ENST00000277198 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.44
C9orf3-201ENST00000277198 MN1Q10571 1320 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 KRT87PA6NCN2 255 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 EFCAB10A6NFE3 127 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 TMEM202A6NGA9 273 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 AQP9O43315 295 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 SNX4O95219 450 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 C1orf105O95561 183 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 VIPP01282 170 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 C1GALT1C1LP0DN25 315 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF8P17098 575 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 AQP1P29972 269 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 GJA4P35212 333 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 XCR1P46094 333 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PCBP3P57721 371 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 CDK6Q00534 326 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 SPIBQ01892 262 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF805Q5CZA5 627 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 LRRC73Q5JTD7 316 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 NCCRP1Q6ZVX7 275 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF367Q7RTV3 350 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 LGI4Q8N135 537 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PPCDCQ96CD2 204 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 CDCA4Q9BXL8 241 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms