RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ACOXLQ9NUZ1 547 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF226Q9NYT6 803 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 IQCMA0A1B0GVH7 501 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 A0A1W2PQF6 199 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ARRDC5A6NEK1 342 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ANKRD66B4E2M5 251 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 WASH3PC4AMC7 463 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 PROB1E7EW31 1015 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CLIC1O00299 241 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CCRL2O00421 344 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 KIAA0513O60268 411 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 SCN2BO60939 215 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 EPN2O95208 641 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CLDN9O95484 217 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 LGI1O95970 557 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF7P17097 686 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 RRM2P31350 389 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 TNFSF8P32971 234 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 PCGF2P35227 344 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 NUDT1P36639 197 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ARL1P40616 181 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CDKN2CP42773 168 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 DGKEP52429 567 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 MRPS15P82914 257 aaKnown RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ENPP2Q13822 863 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF234Q14588 700 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZRANB3Q5FWF4 1079 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 SIGIRRQ6IA17 410 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZC3H14Q6PJT7 736 aaKnown RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 SPATC1Q76KD6 591 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 LRRC70Q7Z2Q7 622 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 NOXA1Q86UR1 476 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CACTIN-AS1Q8N1I8 211 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 STX19Q8N4C7 294 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 L3MBTL4Q8NA19 623 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CYB5D2Q8WUJ1 264 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 MARVELD3Q96A59 401 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 TMEM246Q9BRR3 403 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 WWOXQ9NZC7 414 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 IL17CQ9P0M4 197 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 SNX6Q9UNH7 406 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CAB39Q9Y376 341 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 STON1Q9Y6Q2 735 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 TRBV5-4A0A0C4DH59 114 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 A0A0U1RQS6 177 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 MFN2O95140 757 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 PTHP01270 115 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 HOXB2P14652 356 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 SDC1P18827 310 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 M6PRP20645 277 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 ITGB7P26010 798 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 PKLRP30613 574 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 CSKP41240 450 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 IL12RB1P42701 662 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 KIR3DL1P43629 444 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 GALK2Q01415 458 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 IL1RL1Q01638 556 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 RIPPLY1Q0D2K3 151 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 LRRC74AQ0VAA2 488 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 SRSF5Q13243 272 aaKnown RBP9.87□□□□□ -0.83
UPF3B-201ENST00000276201 KIAA1211LQ6NV74 962 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 NRARPQ7Z6K4 114 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 UBE2FQ969M7 185 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 MCCC1Q96RQ3 725 aaPredicted RBP9.87□□□□□ -0.83
UPF3B-201ENST00000276201 HBEGFQ99075 208 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 THSD1Q9NS62 852 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 DDX28Q9NUL7 540 aaKnown RBP9.87□□□□□ -0.83
UPF3B-201ENST00000276201 ADPRHL2Q9NX46 363 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 KLHL21Q9UJP4 597 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 DLGAP4Q9Y2H0 992 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 V9GYH0 126 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 GPR179Q6PRD1 2367 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 CCDC163A0A0D9SF12 145 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 TCRBV21S2A2A0A5A6 115 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 MEIOCA2RUB1 952 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 hCG_2039718K7EN88 272 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 NPC1O15118 1278 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 CLDN11O75508 207 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 ENGP17813 658 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 MZF1P28698 734 aaPredicted RBP9.87□□□□□ -0.83
UPF3B-201ENST00000276201 ERP29P30040 261 aaKnown RBP9.87□□□□□ -0.83
UPF3B-201ENST00000276201 CDH4P55283 916 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 WNT3P56703 355 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 TEAD4Q15561 434 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 MEDAGQ5VYS4 303 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 MACC1Q6ZN28 852 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 TRIM69Q86WT6 500 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 PLCZ1Q86YW0 608 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 PEX5LQ8IYB4 626 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 APCDD1Q8J025 514 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 RBFAQ8N0V3 343 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 ULK4Q96C45 1275 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 Q96MT0 163 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 MAPKAP1Q9BPZ7 522 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 SRRQ9GZT4 340 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 SLC22A4Q9H015 551 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 NIPAL2Q9H841 368 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms