RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SLC25A19Q9HC21 320 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 ABCB9Q9NP78 766 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 AP1M2Q9Y6Q5 423 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 LRRTM2O43300 516 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 CDRT1O95170 752 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 HSD3B1P14060 373 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 HSD3B2P26439 372 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 CSTF2P33240 577 aaKnown RBP eCLIP26.23■■□□□ 1.793e-7■□□□□ 10.7
CBX4-201ENST00000269397 ETV3P41162 512 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 CRB2Q5IJ48 1285 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 ZNF770Q6IQ21 691 aaPredicted RBP26.23■■□□□ 1.79
CBX4-201ENST00000269397 RNF180Q86T96 592 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 OXR1Q8N573 874 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 SETD6Q8TBK2 473 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 PSIP1O75475 530 aaKnown RBP26.23■■□□□ 1.79
CBX4-201ENST00000269397 SLCO2B1O94956 709 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 FURINP09958 794 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 RHCEP18577 417 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 CST5P28325 142 aaPredicted RBP26.23■■□□□ 1.79
CBX4-201ENST00000269397 RUNX1T1Q06455 604 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 FAM214AQ32MH5 1076 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 C22orf39Q6P5X5 142 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 TMEM38AQ9H6F2 299 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 CFAP97Q9P2B7 532 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 ATP6V1HQ9UI12 483 aa26.23■■□□□ 1.79
CBX4-201ENST00000269397 CKMP06732 381 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 ZNF33BQ06732 778 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 RBBP4Q09028 425 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 Q6ZVU0 165 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 TRIM48Q8IWZ4 208 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 GOT1L1Q8NHS2 421 aaPredicted RBP26.22■■□□□ 1.79
CBX4-201ENST00000269397 KLHL6Q8WZ60 621 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 TMEM159Q96B96 161 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 SLC6A18Q96N87 628 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 SORBS1Q9BX66 1292 aaKnown RBP26.22■■□□□ 1.79
CBX4-201ENST00000269397 PRRG3Q9BZD7 231 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 ELAC1Q9H777 363 aaKnown RBP26.22■■□□□ 1.79
CBX4-201ENST00000269397 DOCK6Q96HP0 2047 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 SCO2O43819 266 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 MPZL2O60487 215 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 OPRD1P41143 372 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 HYAL2Q12891 473 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 KCNC3Q14003 757 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 Q5BKY6 102 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 MED27Q6P2C8 311 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 IQCF1Q8N6M8 205 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 AUTS2Q8WXX7 1259 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 RSPO3Q9BXY4 272 aaPredicted RBP26.22■■□□□ 1.79
CBX4-201ENST00000269397 TMA7Q9Y2S6 64 aaKnown RBP26.22■■□□□ 1.79
CBX4-201ENST00000269397 CMAHPQ9Y471 501 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 A8MVJ9 347 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 KLK1P06870 262 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 RHAGQ02094 409 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 TMIGD1Q6UXZ0 262 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 TCEANCQ8N8B7 351 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 TMEM80Q96HE8 168 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 FAM83DQ9H4H8 585 aa26.22■■□□□ 1.79
CBX4-201ENST00000269397 RC3H2Q9HBD1 1191 aaKnown RBP26.22■■□□□ 1.79
CBX4-201ENST00000269397 TMEM88BA6NKF7 163 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 OR10H3O60404 316 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 GPR37L1O60883 481 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 SEMA7AO75326 666 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 PCBP3P57721 371 aaKnown RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 CD83Q01151 205 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 TNFAIP8L2Q6P589 184 aaPredicted RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 SLCO4C1Q6ZQN7 724 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 RBM45Q8IUH3 476 aaKnown RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 PUM2Q8TB72 1066 aaKnown RBP eCLIP26.21■■□□□ 1.793e-19■■■■■ 37
CBX4-201ENST00000269397 UBASH3BQ8TF42 649 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 SMG9Q9H0W8 520 aaKnown RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 REV1Q9UBZ9 1251 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 ZNF670-ZNF695F2Z2N8 137 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 AP2A2O94973 939 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 HOXC5Q00444 222 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 SLBPQ14493 270 aaKnown RBP eCLIP26.21■■□□□ 1.79
CBX4-201ENST00000269397 LARS2Q15031 903 aaKnown RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 ZNF630Q2M218 657 aaPredicted RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 OR9Q1Q8NGQ5 310 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 C16orf78Q8WTQ4 265 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 TRMT2BQ96GJ1 504 aaKnown RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 RIOK2Q9BVS4 552 aaKnown RBP26.21■■□□□ 1.79
CBX4-201ENST00000269397 STUB1Q9UNE7 303 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 ANGPT4Q9Y264 503 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 KCNE2Q9Y6J6 123 aa26.21■■□□□ 1.79
CBX4-201ENST00000269397 A0A1W2PRB8 838 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 ABLIM3O94929 683 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 APOL3O95236 402 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 IFNA14P01570 189 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 HLA-FP30511 346 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 ZNF91Q05481 1191 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 HNRNPA0Q13151 305 aaKnown RBP26.2■■□□□ 1.78
CBX4-201ENST00000269397 POM121L1PQ3SYA9 428 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 WFDC6Q9BQY6 131 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 UCK2Q9BZX2 261 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 C11orf54Q9H0W9 315 aaPredicted RBP26.2■■□□□ 1.78
CBX4-201ENST00000269397 SEC14L4Q9UDX3 406 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 YARS2Q9Y2Z4 477 aaKnown RBP26.2■■□□□ 1.78
CBX4-201ENST00000269397 LATS1O95835 1130 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 ARAFP10398 606 aa26.2■■□□□ 1.78
CBX4-201ENST00000269397 GJA1P17302 382 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms