RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TBC1D3FA6NER0 549 aaPredicted RBP15.59■□□□□ 0.09
CTCF-201ENST00000264010 IGLON5A6NGN9 336 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 TBC1D3LB9A6J9 549 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 MITFO75030 526 aaPredicted RBP15.59■□□□□ 0.09
CTCF-201ENST00000264010 ERAL1O75616 437 aaKnown RBP15.59■□□□□ 0.09
CTCF-201ENST00000264010 TBC1D3HP0C7X1 549 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 FOSL2P15408 326 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 GPX2P18283 190 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 IL1RNP18510 177 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 GSTM2P28161 218 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 TMEM240Q5SV17 173 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 TBC1D3GQ6DHY5 549 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 TBC1D3CQ6IPX1 549 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 RASSF6Q6ZTQ3 369 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 AHSA2Q719I0 299 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 CBLL1Q75N03 491 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 RNF130Q86XS8 419 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 TBC1D3Q8IZP1 549 aaPredicted RBP15.59■□□□□ 0.09
CTCF-201ENST00000264010 NAGSQ8N159 534 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 IPCEF1Q8WWN9 437 aaPredicted RBP15.59■□□□□ 0.09
CTCF-201ENST00000264010 FRMPD3Q5JV73 1810 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 A0A1W2PRG6 482 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 TMEM221A6NGB7 291 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 ICMTO60725 284 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 KAT7O95251 611 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 ACADMP11310 421 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 ETFAP13804 333 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 HTR2BP41595 481 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 OR52N2Q8NGI0 321 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 NTN4Q9HB63 628 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 ACSL5Q9ULC5 683 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 NOX1Q9Y5S8 564 aa15.59■□□□□ 0.09
CTCF-201ENST00000264010 H3BN98 237 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 SLC1A7O00341 560 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 FOXE1O00358 373 aaPredicted RBP15.58■□□□□ 0.09
CTCF-201ENST00000264010 B4GAT1O43505 415 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 KCNK5O95279 499 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 PCGF2P35227 344 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 FAM78AQ5JUQ0 283 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 ATAT1Q5SQI0 421 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 IER5LQ5T953 404 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 ATAD3BQ5T9A4 648 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 TNFAIP8L2Q6P589 184 aaPredicted RBP15.58■□□□□ 0.09
CTCF-201ENST00000264010 RAB43Q86YS6 212 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 LGI4Q8N135 537 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 CNIH3Q8TBE1 160 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 PIK3R3Q92569 461 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 MAL2Q969L2 176 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 OTUB1Q96FW1 271 aaPredicted RBP15.58■□□□□ 0.09
CTCF-201ENST00000264010 SPATA5L1Q9BVQ7 753 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 RAB11FIP5Q9BXF6 653 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 HSPE1-MOB4S4R3N1 261 aa15.58■□□□□ 0.09
CTCF-201ENST00000264010 ISM1B1AKI9 464 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 GPR37L1O60883 481 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 CCNB2O95067 398 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 CSF2P04141 144 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 PLA2G16P53816 162 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 GRPEL2Q8TAA5 225 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 WDR20Q8TBZ3 569 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 CHTF18Q8WVB6 975 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 NXPE3Q969Y0 559 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 NAA50Q9GZZ1 169 aaKnown RBP15.58■□□□□ 0.08
CTCF-201ENST00000264010 SCN5AQ14524 2016 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 ANKRD34BA5PLL1 514 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 SAGE2PA6NJ88 616 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 XPNPEP2O43895 674 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 DNAJB5O75953 348 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 GADD45GO95257 159 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 B3GALT4O96024 378 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 RAB15P59190 212 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 MTAPQ13126 283 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 RUNX3Q13761 415 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 CHDHQ8NE62 594 aaPredicted RBP15.58■□□□□ 0.08
CTCF-201ENST00000264010 OR5AR1Q8NGP9 310 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 LMLNQ96KR4 655 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 MRPL39Q9NYK5 338 aaKnown RBP15.58■□□□□ 0.08
CTCF-201ENST00000264010 MBD1Q9UIS9 605 aaPredicted RBP15.58■□□□□ 0.08
CTCF-201ENST00000264010 AP1M2Q9Y6Q5 423 aa15.58■□□□□ 0.08
CTCF-201ENST00000264010 CAPN5O15484 640 aaPredicted RBP15.57■□□□□ 0.08
CTCF-201ENST00000264010 CRHBPP24387 322 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 GDI1P31150 447 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 TAP2Q03519 686 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 CASP12Q6UXS9 341 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 PDZD3Q86UT5 571 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 CALHM3Q86XJ0 350 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 TTLQ8NG68 377 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 XAGE5Q8WWM1 108 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 FGF13Q92913 245 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 COQ10AQ96MF6 247 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 SERHLQ9NQF3 203 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 CLN6Q9NWW5 311 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 SEC14L3Q9UDX4 400 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 H7BY64 318 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 UQCRC2P22695 453 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 RPL35P42766 123 aaKnown RBP15.57■□□□□ 0.08
CTCF-201ENST00000264010 CTSKP43235 329 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 ERVK-21P61565 698 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 GNA13Q14344 377 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 GBX1Q14549 363 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 LCTLQ6UWM7 567 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms