RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MUM1Q2TAK8 710 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM214AQ32MH5 1076 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CPTPQ5TA50 214 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 GARNL3Q5VVW2 1013 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 REP15Q6BDI9 236 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TLDC1Q6P9B6 456 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TMEM126BQ8IUX1 230 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TMEM151BQ8IW70 566 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 OR4N5Q8IXE1 308 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 NETO1Q8TDF5 533 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 EXOSC8Q96B26 276 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC7A6OSQ96CW6 309 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CMTM5Q96DZ9 223 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 PEX11GQ96HA9 241 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 OR52E6Q96RD3 313 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 NDC1Q9BTX1 674 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 YIPF2Q9BWQ6 316 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ROGDIQ9GZN7 287 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 MAP10Q9P2G4 905 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ATP6V1HQ9UI12 483 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 DAPP1Q9UN19 280 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CLCA2Q9UQC9 943 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 LOXL2Q9Y4K0 774 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 PCDHGA1Q9Y5H4 931 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 A0A088AWK7 358 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 A0A1W2PP18 115 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 MRASO14807 208 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 DSCR3O14972 297 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 POLR1CO15160 346 aaPredicted RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PRMT3O60678 531 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 JRKO75564 520 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 SCRG1O75711 98 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 KIAA0754O94854 1291 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 NSA2O95478 260 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 C1QCP02747 245 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PGRP06401 933 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 DDCP20711 480 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 CSRP1P21291 193 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 ZNF10P21506 573 aaPredicted RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 CALB2P22676 271 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PRDX6P30041 224 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 HPCAL1P37235 193 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 AVPR1BP47901 424 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 NOVA1P51513 510 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 CLNS1AP54105 237 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 NCALDP61601 193 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 TRA2BP62995 288 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 MC2RQ01718 297 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PDE7AQ13946 482 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM53BQ14153 422 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 MMEL1Q495T6 779 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PPP1R3BQ86XI6 285 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 CLECL1Q8IZS7 167 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 GLB1L3Q8NCI6 653 aaPredicted RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 TESCQ96BS2 214 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 MIEF2Q96C03 454 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PPCDCQ96CD2 204 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 CLIP3Q96DZ5 547 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 INPP5KQ9BT40 448 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC25A23Q9BV35 468 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 DUSP26Q9BV47 211 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 TRIM8Q9BZR9 551 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC7A5P2Q9GIP4 190 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 ACTR5Q9H9F9 607 aaPredicted RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 AKIRIN1Q9H9L7 192 aaPredicted RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 MIEF1Q9NQG6 463 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC6A13Q9NSD5 602 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 LYARQ9NX58 379 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC39A1Q9NY26 324 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PISDQ9UG56 409 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 CES1P1Q9UKY3 287 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 ERVK-11Q9UQG0 969 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 NDUFAF1Q9Y375 327 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PCDHA9Q9Y5H5 950 aa9.19□□□□□ -0.94
SNRNP40-201ENST00000263694 PTPRBP23467 1997 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 TEX51A0A1B0GUA7 166 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 CYR61O00622 381 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 ANGPT2O15123 496 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 B4GALT2O60909 372 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 SCN2BO60939 215 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 LDB3O75112 727 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 ERAL1O75616 437 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 CDC123O75794 336 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 DKK1O94907 266 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 UNC5CO95185 931 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 CPSF4O95639 269 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 IL6P05231 212 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 GSNP06396 782 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 NR2F6P10588 404 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 FGF5P12034 268 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 CDKN2CP42773 168 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 KIR3DL1P43629 444 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 NUDT2P50583 147 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 C21orf58P58505 322 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 IRX1P78414 480 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 BTG2P78543 158 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 MXRA7P84157 204 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 TNFRSF17Q02223 184 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 SRSF11Q05519 484 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 DUSP2Q05923 314 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms