RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CCL14Q16627 93 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 FOXR2Q6PJQ5 311 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 UBQLNLQ8IYU4 475 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 GALNT6Q8NCL4 622 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 FUBP3Q96I24 572 aaKnown RBP eCLIP13.77□□□□□ -0.21
CUX2-201ENST00000261726 NEDD4LQ96PU5 975 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 H7C2Y5 167 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 INPPL1O15357 1258 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 PEX14O75381 377 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 GALK2Q01415 458 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 SPRYD7Q5W111 196 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 AGTRAPQ6RW13 159 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 CCDC116Q8IYX3 515 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 MAB21L2Q9Y586 359 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 LATS1O95835 1130 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 AMY2BP19961 511 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 DENND1AQ8TEH3 1009 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 SLC29A3Q9BZD2 475 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 RANBP3Q9H6Z4 567 aaPredicted RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 PRTFDC1Q9NRG1 225 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 EXOSC1Q9Y3B2 195 aaKnown RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 OGDHQ02218 1023 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 MFSD13AQ14CX5 517 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 OR9A1PQ8NGU1 263 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 DLGAP4Q9Y2H0 992 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 MDFIC2A0A1B0GVS7 189 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 IRF2P14316 349 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 LEPRP48357 1165 aaKnown RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 DCDC5Q6ZRR9 648 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 DPY19L4Q7Z388 723 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 NAT8LQ8N9F0 302 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 RADILQ96JH8 1075 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 PHB2Q99623 299 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 OR12D1P0DN82 309 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 FPR1P21462 350 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 IL1R2P27930 398 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 MVKQ03426 396 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 TRAM2Q15035 370 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 RABL3Q5HYI8 236 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 KIAA1614Q5VZ46 1190 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 TRAPPC6BQ86SZ2 158 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 C17orf50Q8WW18 174 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 THAP4Q8WY91 577 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 LRCH3Q96II8 777 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 MRPL15Q9P015 296 aaKnown RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 CLEC4EQ9ULY5 219 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 DLX3O60479 287 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 AHSGP02765 367 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 GKN3PP0CG01 181 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 PFKLP17858 780 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 ELK4P28324 431 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 LUMP51884 338 aaPredicted RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 TUBA1BP68363 451 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 ZNF404Q494X3 552 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 TMEM69Q5SWH9 247 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 ZNF648Q5T619 568 aaPredicted RBP13.76□□□□□ -0.21
CUX2-201ENST00000261726 TUBA1AQ71U36 451 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 PGAM5Q96HS1 289 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 TAS2R9Q9NYW1 312 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 GIMAP2Q9UG22 337 aa13.76□□□□□ -0.21
CUX2-201ENST00000261726 ALS2Q96Q42 1657 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 TUBA3CQ13748 450 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 LRRC46Q96FV0 321 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 OR5B12Q96R08 314 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 RPH3AQ9Y2J0 694 aaPredicted RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 ANKRD66B4E2M5 251 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 F5H0A9 414 aaPredicted RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 SLC19A2O60779 497 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 GLDCP23378 1020 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 LSSP48449 732 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 ZNF100Q8IYN0 542 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 WDR20Q8TBZ3 569 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 DOK4Q8TEW6 326 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 KATNBL1Q9H079 304 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 HRASLS2Q9NWW9 162 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 ZFR2Q9UPR6 939 aaKnown RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 SOCS2O14508 198 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 PTPRCAPQ14761 206 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 FBXL18Q96ME1 805 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 RAD9AQ99638 391 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 STRADBQ9C0K7 418 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 PLEKHA3Q9HB20 300 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 FAM120CQ9NX05 1096 aaKnown RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 SARDHQ9UL12 918 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 H7BY64 318 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 GRID2O43424 1007 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 ZNF630Q2M218 657 aaPredicted RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 LRIT3Q3SXY7 679 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 HSD17B12Q53GQ0 312 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 LIPKQ5VXJ0 399 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 RAET1LQ5VY80 246 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 GPR139Q6DWJ6 353 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 PIGWQ7Z7B1 504 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 GALNT10Q86SR1 603 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 PROKR1Q8TCW9 393 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms