RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SMG8Q8ND04 991 aaKnown RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 TAS2R9Q9NYW1 312 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 UNC119BA6NIH7 251 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 DISC1C4P0D8 188 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 NPIPA2E9PIF3 369 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 NPIPA3F8WFD2 350 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF821O75541 412 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ARL6IP5O75915 188 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 PLATP00750 562 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 STOMP27105 288 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 HERV-K104P61576 105 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 KCNC3Q14003 757 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 GRK1Q15835 563 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 SLC25A25Q6KCM7 469 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 TIFABQ6ZNK6 161 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 DPY19L3Q6ZPD9 716 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 LINC00471Q8N535 108 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 SCGB3A2Q96PL1 93 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 RMI1Q9H9A7 625 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 DKK3Q9UBP4 350 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 SH2B3Q9UQQ2 575 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 IGLON5A6NGN9 336 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 DLDP09622 509 aaKnown RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 RPS21P63220 83 aaKnown RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 GAS6Q14393 721 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 GINS1Q14691 196 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 FBXO43Q4G163 708 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 NANOGP8Q6NSW7 305 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 DENND6BQ8NEG7 585 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 S100A16Q96FQ6 103 aaKnown RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 NANOGQ9H9S0 305 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 HCN4Q9Y3Q4 1203 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 BCAS2O75934 225 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 SYNGR4O95473 234 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 MAGEA11P43364 429 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 TBPL1P62380 186 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ABRAXAS2Q15018 415 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 LRRC37A5PQ49AS3 106 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 CDKL4Q5MAI5 379 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 PSAPL1Q6NUJ1 521 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 FAM86B1Q8N7N1 296 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 GRPEL2Q8TAA5 225 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF431Q8TF32 576 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 LRRC15Q8TF66 581 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF717Q9BY31 904 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF226Q9NYT6 803 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 K7ERQ8 282 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 SOCS2O14508 198 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 CSF2P04141 144 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 PVALBP20472 110 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 CD72P21854 359 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 DNAJB13P59910 316 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 UBE2Q1Q7Z7E8 422 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 HSPA12BQ96MM6 686 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 TIGARQ9NQ88 270 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 TMEM59LQ9UK28 342 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 WASF3Q9UPY6 502 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 PHRF1Q9P1Y6 1649 aaKnown RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 DFNA5O60443 496 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 SLC15A1P46059 708 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 RUNDC3AQ59EK9 446 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 OR4N5Q8IXE1 308 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 OR10T2Q8NGX3 314 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 WDR20Q8TBZ3 569 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 KCNJ9Q92806 393 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 OR1F2PQ96R84 312 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 SPATA6Q9NWH7 488 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 FTSJ1Q9UET6 329 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 LATO43561 262 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 BCKDHAP12694 445 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 GLP1RP43220 463 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 SLC18A1P54219 525 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 DEFB134Q4QY38 66 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 FAM180BQ6P0A1 224 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 UBQLNLQ8IYU4 475 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 BOLLQ8N9W6 283 aaKnown RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 NINJ1Q92982 152 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF285Q96NJ3 590 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF317Q96PQ6 595 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 F2RL3Q96RI0 385 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF701Q9NV72 531 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 MGAT4BQ9UQ53 548 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 PCDHGB2Q9Y5G2 931 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ARFGEF2Q9Y6D5 1785 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 KLF11O14901 512 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 CSF2RAP15509 400 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 PFKLP17858 780 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ALG10Q5BKT4 473 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 TRAM1L1Q8N609 369 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 BBS10Q8TAM1 723 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF675Q8TD23 568 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 GATAD2BQ8WXI9 593 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 BADQ92934 168 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 GLYATL1Q969I3 302 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 SLC30A2Q9BRI3 323 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ZFR2Q9UPR6 939 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms