RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PPP1R32Q7Z5V6 425 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 MRGPREQ86SM8 312 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 ZC3H7AQ8IWR0 971 aaKnown RBP15.83■□□□□ 0.12
SDCBP-201ENST00000260130 SHISA5Q8N114 240 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 OR4F6Q8NGB9 312 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 OR5T3Q8NGG3 340 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 CMTM7Q96FZ5 175 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 WBP1Q96G27 269 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 C20orf27Q9GZN8 174 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 C3orf18Q9UK00 162 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 MAGEA13PA6NCF6 341 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 CHST10O43529 356 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 DNAJB6O75190 326 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 FKBP6O75344 327 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 TGFB1P01137 390 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 PEX19P40855 299 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 EMP2P54851 167 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 TGM3Q08188 693 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 ATP1A4Q13733 1029 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 C1orf146Q5VVC0 180 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 ABHD17CQ6PCB6 329 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 ZCCHC23Q6ZST2 131 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 CHSY3Q70JA7 882 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 SRFBP1Q8NEF9 429 aaKnown RBP15.82■□□□□ 0.12
SDCBP-201ENST00000260130 FBXO27Q8NI29 283 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 WDR20Q8TBZ3 569 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 MAGEB10Q96LZ2 347 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-201ENST00000260130 MTERF1Q99551 399 aaKnown RBP15.82■□□□□ 0.12
SDCBP-201ENST00000260130 MID2Q9UJV3 735 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 A0A088AWK7 358 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 IDSB3KWA1 339 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 PEX12O00623 359 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 JRKO75564 520 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 HEXBP07686 556 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 ZNF10P21506 573 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-201ENST00000260130 IL10P22301 178 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 SLC1A6P48664 564 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 OLR1P78380 273 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 PHEXP78562 749 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 GGTA1PQ4G0N0 100 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 TMEM35AQ53FP2 167 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 PCSK4Q6UW60 755 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 RNF175Q8N4F7 328 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 PEX11GQ96HA9 241 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 OXSMQ9NWU1 459 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 P4HTMQ9NXG6 502 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 NDE1Q9NXR1 346 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 SLC7A8Q9UHI5 535 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 MKL2Q9ULH7 1088 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 HS3ST3B1Q9Y662 390 aa15.82■□□□□ 0.12
SDCBP-201ENST00000260130 IGSF10Q6WRI0 2623 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 A0A0G2JN53 185 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 A0A1B0GTL3 188 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 ARGFXA6NJG6 315 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 MLYCDO95822 493 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 GRK2P25098 689 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 NEK2P51955 445 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 DNAJB13P59910 316 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 DEPDC1Q5TB30 811 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 MED25Q71SY5 747 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 CCNYL1Q8N7R7 359 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 TMEM102Q8N9M5 508 aaPredicted RBP15.81■□□□□ 0.12
SDCBP-201ENST00000260130 QRFPRQ96P65 431 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 OR1F2PQ96R84 312 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 NR1H4Q96RI1 486 aaPredicted RBP15.81■□□□□ 0.12
SDCBP-201ENST00000260130 TSC22D3Q99576 134 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 EBF4Q9BQW3 602 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 ING2Q9H160 280 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 OR51B5Q9H339 312 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 DMRT3Q9NQL9 472 aa15.81■□□□□ 0.12
SDCBP-201ENST00000260130 AHCYL1O43865 530 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 SH3BGRLO75368 114 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 SERPINE1P05121 402 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 PTX3P26022 381 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 NAGLUP54802 743 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 POLE2P56282 527 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 UBAP2LQ14157 1087 aaKnown RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 KHDRBS2Q5VWX1 349 aaKnown RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 FRG2Q64ET8 278 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 LETMD1Q6P1Q0 360 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 AAGABQ6PD74 315 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 LSM14AQ8ND56 463 aaKnown RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 MTFMTQ96DP5 389 aaKnown RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 KCNC2Q96PR1 638 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 FRG2BQ96QU4 278 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 ZNF382Q96SR6 550 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 NPLQ9BXD5 320 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 PRDM7Q9NQW5 492 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 ZNF225Q9UK10 706 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 RALYQ9UKM9 306 aaKnown RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 MAGEB17A8MXT2 336 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 FOXE1O00358 373 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 SOCS6O14544 535 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 ATXN7O15265 892 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 FESP07332 822 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 FAM87AP0C7U9 286 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 RRADP55042 308 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 NAA20P61599 178 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 RPS13P62277 151 aaKnown RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 LCP2Q13094 533 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms