RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 AQP6Q13520 282 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 IFI44LQ53G44 452 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 RPS26P11Q5JNZ5 115 aaPredicted RBP17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 SLC16A12Q6ZSM3 486 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 ADCK2Q7Z695 626 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 SLC5A8Q8N695 610 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 RAB2BQ8WUD1 216 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 MAGED4Q96JG8 741 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 FERD3LQ96RJ6 166 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 PELI2Q9HAT8 420 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 WASH6PQ9NQA3 447 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 IMP3Q9NV31 184 aaKnown RBP17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 RAB23Q9ULC3 237 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 PNMA8BQ9ULN7 279 aaPredicted RBP17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 PCDHGA10Q9Y5H3 936 aa17.81■□□□□ 0.44
PDLIM4-201ENST00000253754 OR1F1O43749 312 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 TMPRSS11DO60235 418 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 LCMT2O60294 686 aaKnown RBP17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 ADAM23O75077 832 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 KLF8O95600 359 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 ADH1BP00325 375 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 VIPP01282 170 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 RPN2P04844 631 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 ITIH1P19827 911 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 SLC35A2P78381 396 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 REEP5Q00765 189 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 HSPB3Q12988 150 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 ARHGAP19Q14CB8 494 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 TNFAIP8L2Q6P589 184 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 PARP8Q8N3A8 854 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 ABHD11Q8NFV4 315 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 APH1BQ8WW43 257 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 SMPDL3AQ92484 453 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 EPS8L2Q9H6S3 715 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 TRPV5Q9NQA5 729 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 SH3GLB1Q9Y371 365 aa17.8■□□□□ 0.44
PDLIM4-201ENST00000253754 IGKV1-8A0A0C4DH67 115 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 WBP4O75554 376 aaKnown RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 SERPIND1P05546 499 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 MASP1P48740 699 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 RBBP4Q09028 425 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 SPCS2Q15005 226 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 EXOC3L2Q2M3D2 409 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 ZNF776Q68DI1 518 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 CCDC81Q6ZN84 652 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 ENTHD1Q8IYW4 607 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 DRAXINQ8NBI3 349 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 GANCQ8TET4 914 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 GIPC3Q8TF64 312 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 EXOSC8Q96B26 276 aaKnown RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 ZNF300Q96RE9 604 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 NIPSNAP1Q9BPW8 284 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 MACROD1Q9BQ69 325 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 DUSP21Q9H596 190 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 FZD3Q9NPG1 666 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 PRDM6Q9NQX0 595 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 TEX10Q9NXF1 929 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 AHSPQ9NZD4 102 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 PCDHGA6Q9Y5G7 932 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 OR52A4PA6NMU1 304 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 ZNF99A8MXY4 864 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 NARSO43776 548 aaKnown RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 DPM1O60762 260 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 MT-ND2P03891 347 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 ARAFP10398 606 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 HOXB3P14651 431 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 HOXB2P14652 356 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 JUNDP17535 347 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 TFF2Q03403 129 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 GANABQ14697 944 aaKnown RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 ANKDD1AQ495B1 522 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 TSPYL5Q86VY4 417 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 SLC44A2Q8IWA5 706 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 HORMAD2Q8N7B1 307 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 TP53I13Q8NBR0 393 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 ZNF540Q8NDQ6 660 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 OR10G2Q8NGC3 310 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 OR9Q2Q8NGE9 314 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 OR4C15Q8NGM1 316 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 PITX2Q99697 317 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 GABRG3Q99928 467 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 C8orf33Q9H7E9 229 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 MOSPD1Q9UJG1 213 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 PSME2Q9UL46 239 aa17.79■□□□□ 0.44
PDLIM4-201ENST00000253754 WASHC1A8K0Z3 465 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 ADAMDEC1O15204 470 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 B4GALT2O60909 372 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 FAM20BO75063 409 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 NDUFS2O75306 463 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 FADS2O95864 444 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 UQCRC2P22695 453 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 MAT2AP31153 395 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 TRIM23P36406 574 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 MLLT10P55197 1068 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 PCBP3P57721 371 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 DSTNP60981 165 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 TCEA2Q15560 299 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 ZNF630Q2M218 657 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 CEACAM20Q6UY09 585 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 WASH2PQ6VEQ5 465 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms