RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SGTAO43765 313 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 LZTS3O60299 673 aaPredicted RBP11.44□□□□□ -0.58
USHBP1-201ENST00000252597 IL3P08700 152 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 MYL9P24844 172 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 TIE1P35590 1138 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 RFX3P48380 749 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 XKP51811 444 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 ACLYP53396 1101 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 CRYBA2P53672 197 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 CRISP1P54107 249 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 SP3Q02447 781 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 NDUFA5Q16718 116 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 ZNF284Q2VY69 593 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 CCDC58Q4VC31 144 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 DCST1Q5T197 706 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 KRT74Q7RTS7 529 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 COMMD6Q7Z4G1 85 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 KRT73Q86Y46 540 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 CD99L2Q8TCZ2 262 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 ASB11Q8WXH4 323 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 PIK3R3Q92569 461 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 SLC9A6Q92581 669 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 TESCQ96BS2 214 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 OMA1Q96E52 524 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 ARSGQ96EG1 525 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 TMEM169Q96HH4 297 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 TSSK6Q9BXA6 273 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 SLC12A9Q9BXP2 914 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 NLNQ9BYT8 704 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 ABCG4Q9H172 646 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 SEC14L3Q9UDX4 400 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 MAN2B2Q9Y2E5 1009 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 DYRK1BQ9Y463 629 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 HSPE1-MOB4S4R3N1 261 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 EOMESO95936 686 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 MYL12AP19105 171 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 TM4SF4P48230 202 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 DOC2BQ14184 412 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 INSL4Q14641 139 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 NCF4Q15080 339 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 GPR33Q49SQ1 333 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 FRMPD2BQ6IN97 320 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 KIAA1161Q6NSJ0 714 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 MACC1Q6ZN28 852 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 TPRG1Q6ZUI0 275 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 ELMOD1Q8N336 334 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 MRPS31Q92665 395 aaKnown RBP11.44□□□□□ -0.58
USHBP1-201ENST00000252597 EFHD2Q96C19 240 aaPredicted RBP11.44□□□□□ -0.58
USHBP1-201ENST00000252597 TMCO6Q96DC7 493 aa11.44□□□□□ -0.58
USHBP1-201ENST00000252597 H7C0S8 307 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 AKR7A2O43488 359 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 C8GP07360 202 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 FADDQ13158 208 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 IRF5Q13568 498 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 SSX1Q16384 188 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 DDI2Q5TDH0 399 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 ANXA8L1Q5VT79 327 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 MTFR2Q6P444 385 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 OR5D16Q8NGK9 328 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 SLC9A8Q9Y2E8 581 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 ALPK2Q86TB3 2170 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 C2orf92A0A1B0GVN3 265 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 H3BQ06 376 aaPredicted RBP11.43□□□□□ -0.58
USHBP1-201ENST00000252597 CD72P21854 359 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 IDSP22304 550 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 MAN2A2P49641 1150 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 TLE2Q04725 743 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 MRPL28Q13084 256 aaKnown RBP11.43□□□□□ -0.58
USHBP1-201ENST00000252597 TEAD4Q15561 434 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 MED27Q6P2C8 311 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 FAHD1Q6P587 224 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 TRIM69Q86WT6 500 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 FAM20CQ8IXL6 584 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 OR6F1Q8NGZ6 308 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 RAET1EQ8TD07 263 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 KLHL6Q8WZ60 621 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 PLD4Q96BZ4 506 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 QRSL1Q9H0R6 528 aaKnown RBP11.43□□□□□ -0.58
USHBP1-201ENST00000252597 C11orf54Q9H0W9 315 aaPredicted RBP11.43□□□□□ -0.58
USHBP1-201ENST00000252597 KLHL1Q9NR64 748 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 CXXC1Q9P0U4 656 aaPredicted RBP11.43□□□□□ -0.58
USHBP1-201ENST00000252597 TBC1D24Q9ULP9 559 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 ANGPT4Q9Y264 503 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 PCDHGA2Q9Y5H1 932 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 SNX11Q9Y5W9 270 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 MYOFQ9NZM1 2061 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 LOC102723532A0A0G2JNH3 316 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.43□□□□□ -0.58
USHBP1-201ENST00000252597 ZSCAN5BA6NJL1 495 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 INPPL1O15357 1258 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 NTN1O95631 604 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 NR2F1P10589 423 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 ITGA2P17301 1181 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 CSTF2P33240 577 aaKnown RBP eCLIP11.43□□□□□ -0.58
USHBP1-201ENST00000252597 PLAG1Q6DJT9 500 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 HSD11B1LQ7Z5J1 315 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 GALNT13Q8IUC8 556 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 FATE1Q969F0 183 aa11.43□□□□□ -0.58
USHBP1-201ENST00000252597 LRR1Q96L50 414 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms