RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 OR4C15Q8NGM1 316 aa23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 GIPC3Q8TF64 312 aa23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 EXOSC8Q96B26 276 aaKnown RBP23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 RIPOR3Q96MK2 946 aa23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 TEFMQ96QE5 360 aaKnown RBP23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 GABARAPL3Q9BY60 117 aa23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 FGF22Q9HCT0 170 aa23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 SIRT3Q9NTG7 399 aaPredicted RBP23.95■■□□□ 1.42
TMEM55B-201ENST00000250489 A0A0A6YYD5 115 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 PRAMEF33A0A0G2JMD5 474 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 SCAMP1O15126 338 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 PRICKLE3O43900 615 aaPredicted RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 EGFP01133 1207 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 FMO3P31513 532 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 TRA2BP62995 288 aaKnown RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 RPE65Q16518 533 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 CEACAM20Q6UY09 585 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 TSPYL5Q86VY4 417 aaPredicted RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 HORMAD2Q8N7B1 307 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 GEMIN6Q8WXD5 167 aaKnown RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 PDXPQ96GD0 296 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 DCUN1D5Q9BTE7 237 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 SLC6A20Q9NP91 592 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 MRPS30Q9NP92 439 aaKnown RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 HEATR5BQ9P2D3 2071 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 A0A0G2JN53 185 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 LRIT2A6NDA9 550 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 PPM1DO15297 605 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 PRAMEF10O60809 474 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 KLF8O95600 359 aaPredicted RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 ITGA2P17301 1181 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 JUNDP17535 347 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 CTHP32929 405 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 BCL6P41182 706 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 PLA2G16P53816 162 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 TMBIM6P55061 237 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 CXCR4P61073 352 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 RPS26P62854 115 aaKnown RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 ZIC1Q15915 447 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 ARMC8Q8IUR7 673 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 MUL1Q969V5 352 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 SCHIP1Q9P0W5 487 aaPredicted RBP23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 AASSQ9UDR5 926 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 RAB23Q9ULC3 237 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 ZNF451Q9Y4E5 1061 aa23.94■■□□□ 1.42
TMEM55B-201ENST00000250489 TMX2-CTNND1H3BSU7 103 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 SPIBQ01892 262 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 HSPB3Q12988 150 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 MAD2L1BPQ15013 274 aaPredicted RBP23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 CYP27C1Q4G0S4 372 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 REEP3Q6NUK4 255 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 DHRS4L2Q6PKH6 230 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 CCDC71Q8IV32 467 aaPredicted RBP23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 C17orf62Q9BQA9 187 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 A4GALTQ9NPC4 353 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 SNX11Q9Y5W9 270 aa23.93■■□□□ 1.42
TMEM55B-201ENST00000250489 B4GALT2O60909 372 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 NOL3O60936 208 aaKnown RBP23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 DNAJB5O75953 348 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 ITIH1P19827 911 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 PCMT1P22061 227 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 SSR2P43308 183 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 CDH12P55289 794 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 RPP38P78345 283 aaKnown RBP23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 TMEM35AQ53FP2 167 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 TNFAIP8L2Q6P589 184 aaPredicted RBP23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 ZNF793Q6ZN11 406 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 SMYD1Q8NB12 490 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 OR10G2Q8NGC3 310 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 UCN3Q969E3 161 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 ZBED6CLQ96FA7 236 aaPredicted RBP23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 FEVQ99581 238 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 DPH7Q9BTV6 452 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 PEBP1P30086 187 aaKnown RBP23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 XCR1P46094 333 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 ABATP80404 500 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 HTR4Q13639 388 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 C6orf120Q7Z4R8 191 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 ASB12Q8WXK4 309 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 OR2M4Q96R27 311 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 KLHL31Q9H511 634 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 DUSP21Q9H596 190 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 ACSS1Q9NUB1 689 aaPredicted RBP23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 TAS2R7Q9NYW3 318 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 TPRKBQ9Y3C4 175 aa23.92■■□□□ 1.42
TMEM55B-201ENST00000250489 A0A1W2PPW3 197 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 PRSS38A1L453 326 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 HAT1O14929 419 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 GRK3P35626 688 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 SPDYE7PQ495Y7 208 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 FBXL6Q8N531 539 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 SLC5A8Q8N695 610 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 OR2L3Q8NG85 312 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 CCDC90BQ9GZT6 254 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 SPHK1Q9NYA1 384 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 SCML1Q9UN30 329 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 PCDHGB1Q9Y5G3 927 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 POM121BA6NF01 834 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 STATHP02808 62 aa23.91■■□□□ 1.42
TMEM55B-201ENST00000250489 HOXB3P14651 431 aaPredicted RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms