RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 DEPDC7Q96QD5 511 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 OR52E6Q96RD3 313 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 DUSP26Q9BV47 211 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 SORBS1Q9BX66 1292 aaKnown RBP12.24□□□□□ -0.45
LSM8-201ENST00000249299 SPRTNQ9H040 489 aaPredicted RBP12.24□□□□□ -0.45
LSM8-201ENST00000249299 SYNDIG1Q9H7V2 258 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 ACSS1Q9NUB1 689 aaPredicted RBP12.24□□□□□ -0.45
LSM8-201ENST00000249299 IRAK4Q9NWZ3 460 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 TAS2R1Q9NYW7 299 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 EXO1Q9UQ84 846 aaKnown RBP12.24□□□□□ -0.45
LSM8-201ENST00000249299 AP3M1Q9Y2T2 418 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 NAALAD2Q9Y3Q0 740 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 GMEB1Q9Y692 573 aa12.24□□□□□ -0.45
LSM8-201ENST00000249299 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 C15orf38-AP3S2A0A0A6YYH1 394 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 A0A1B0GX78 115 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 A0A1W2PR48 441 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 FBP2O00757 339 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 MRASO14807 208 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 TM4SF5O14894 197 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ZNF749O43361 778 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 SCN2BO60939 215 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 GBAP04062 536 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 IFI6P09912 130 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ZCCHC18P0CG32 403 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 NR2F6P10588 404 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 PIM1P11309 404 aaPredicted RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 RNH1P13489 461 aaKnown RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 CEACAM1P13688 526 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 CPOXP36551 454 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 FRKP42685 505 aaPredicted RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 PDX1P52945 283 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 HNRNPH2P55795 449 aaKnown RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 RAB38P57729 211 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 INSM1Q01101 510 aaPredicted RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 TNFRSF17Q02223 184 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 CEBPEQ15744 281 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 GPR19Q15760 415 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ISXQ2M1V0 245 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 TIGD2Q4W5G0 525 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 REP15Q6BDI9 236 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 SLC48A1Q6P1K1 146 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ASRGL1Q7L266 308 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ARPINQ7Z6K5 226 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 PDSS2Q86YH6 399 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 PGAM4Q8N0Y7 254 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 POU5F2Q8N7G0 328 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 BMPERQ8N8U9 685 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 GOT1L1Q8NHS2 421 aaPredicted RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 CLHC1Q8NHS4 586 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ZCCHC10Q8TBK6 192 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ZBED6CLQ96FA7 236 aaPredicted RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 LRFN5Q96NI6 719 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 CCDC115Q96NT0 180 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 OR1F2PQ96R84 312 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 OR6C1Q96RD1 312 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 DPH2Q9BQC3 489 aaPredicted RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 CES1P1Q9UKY3 287 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 MRPS33Q9Y291 106 aaKnown RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 MAP4K5Q9Y4K4 846 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ATG4BQ9Y4P1 393 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 ASCC3Q8N3C0 2202 aaKnown RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 UNC13CQ8NB66 2214 aa12.23□□□□□ -0.45
LSM8-201ENST00000249299 SNRNP200O75643 2136 aaKnown RBP12.23□□□□□ -0.45
LSM8-201ENST00000249299 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 CYR61O00622 381 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 GYG2O15488 501 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 AKAP10O43572 662 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 SLITRK5O94991 958 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 LRATO95237 230 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 STATHP02808 62 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 CYC1P08574 325 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 IL1RNP18510 177 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 SDHBP21912 280 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 CPN2P22792 545 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 MAGEA8P43361 318 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 WNT3P56703 355 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 NCALDP61601 193 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 ACTN3Q08043 901 aaPredicted RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 RUNX2Q13950 521 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 C16orf72Q14CZ0 275 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 TRMT5Q32P41 509 aaKnown RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 LRIF1Q5T3J3 769 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 C8orf82Q6P1X6 216 aaPredicted RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 ASCL5Q7RTU5 278 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 RETREG3Q86VR2 466 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 TICAM1Q8IUC6 712 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 ZNF595Q8IYB9 648 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 DSELQ8IZU8 1212 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 AMER3Q8N944 861 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 RCBTB1Q8NDN9 531 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 RBM15BQ8NDT2 890 aaKnown RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 OR7A2PQ8NGA2 310 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 PSMA8Q8TAA3 256 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 KLHL29Q96CT2 875 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms