RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SPIBQ01892 262 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 FGL2Q14314 439 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 SPCS2Q15005 226 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 MLF2Q15773 248 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-201ENST00000237186 EXOC3L2Q2M3D2 409 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 GPR153Q6NV75 609 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 UBE3DQ7Z6J8 389 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 YAF2Q8IY57 180 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 LGI4Q8N135 537 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 PARP8Q8N3A8 854 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 TTLQ8NG68 377 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 APOBEC4Q8WW27 367 aaKnown RBP15.39■□□□□ 0.05
UBE3D-201ENST00000237186 CAMK1GQ96NX5 476 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 TMEM121BQ9BXQ6 578 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-201ENST00000237186 RASSF1Q9NS23 344 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 SIRT3Q9NTG7 399 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-201ENST00000237186 SERGEFQ9UGK8 458 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 KCND3Q9UK17 655 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 HCN4Q9Y3Q4 1203 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 ZNF451Q9Y4E5 1061 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 OR1A2Q9Y585 309 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 KIAA1549LQ6ZVL6 1849 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 FEZF1A0PJY2 475 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 CACNB4O00305 520 aaPredicted RBP15.38■□□□□ 0.05
UBE3D-201ENST00000237186 PAK4O96013 591 aaPredicted RBP15.38■□□□□ 0.05
UBE3D-201ENST00000237186 TFPTP0C1Z6 253 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 PSMB5P28074 263 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 MAP2K4P45985 399 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 ST13P50502 369 aaKnown RBP15.38■□□□□ 0.05
UBE3D-201ENST00000237186 RAB28P51157 221 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 BMXP51813 675 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 CYP4F2P78329 520 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 UBE2UQ5VVX9 321 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 CEACAM20Q6UY09 585 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 OR2A1Q8NGT9 310 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 CREB3L4Q8TEY5 395 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 SLC38A5Q8WUX1 472 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 TRUB1Q8WWH5 349 aaKnown RBP15.38■□□□□ 0.05
UBE3D-201ENST00000237186 ERLEC1Q96DZ1 483 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 ZBED6CLQ96FA7 236 aaPredicted RBP15.38■□□□□ 0.05
UBE3D-201ENST00000237186 KCNC2Q96PR1 638 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 FERD3LQ96RJ6 166 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 RLIMQ9NVW2 624 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 FKBP14Q9NWM8 211 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 ENOPH1Q9UHY7 261 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 RAB23Q9ULC3 237 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 SLC17A4Q9Y2C5 497 aa15.38■□□□□ 0.05
UBE3D-201ENST00000237186 KIF26AQ9ULI4 1882 aaPredicted RBP15.38■□□□□ 0.05
UBE3D-201ENST00000237186 IGKV1-8A0A0C4DH67 115 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 NDUFS4O43181 175 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 OR1F1O43749 312 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 TMPRSS11DO60235 418 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 LCMT2O60294 686 aaKnown RBP15.37■□□□□ 0.05
UBE3D-201ENST00000237186 DRD2P14416 443 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 RAB15P59190 212 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 RPS21P63220 83 aaKnown RBP15.37■□□□□ 0.05
UBE3D-201ENST00000237186 OR4C11Q6IEV9 310 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 TMEM184AQ6ZMB5 413 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 C6orf120Q7Z4R8 191 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 P3H2Q8IVL5 708 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 DEPDC4Q8N2C3 294 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 HORMAD2Q8N7B1 307 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 DENND6BQ8NEG7 585 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 OR2L8Q8NGY9 312 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 FAM81AQ8TBF8 368 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 DNASE1L2Q92874 299 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 C12orf66Q96MD2 445 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 RAB11FIP5Q9BXF6 653 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 PBX4Q9BYU1 374 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 BTBD1Q9H0C5 482 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 ABCG4Q9H172 646 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 PREBQ9HCU5 417 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 TBC1D23Q9NUY8 699 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 PSORS1C1Q9UIG5 152 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 SH3GLB1Q9Y371 365 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 FAM32AQ9Y421 112 aaKnown RBP15.37■□□□□ 0.05
UBE3D-201ENST00000237186 SNX8Q9Y5X2 465 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 A0A0A6YYD5 115 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 A0A1W2PP55 124 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 B4GALT2O60909 372 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 MFN2O95140 757 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 CEACAM5P06731 702 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 ACP5P13686 325 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 GABRB1P18505 474 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 CBLP22681 906 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 WASP42768 502 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 TNFRSF4P43489 277 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 ARFIP1P53367 373 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 C21orf59P57076 290 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 PUM1Q14671 1186 aaKnown RBP eCLIP15.37■□□□□ 0.05
UBE3D-201ENST00000237186 ZIC1Q15915 447 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 DUSP7Q16829 419 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 ITPRIPL2Q3MIP1 535 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 TMEM35AQ53FP2 167 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 DUS1LQ6P1R4 473 aaKnown RBP15.37■□□□□ 0.05
UBE3D-201ENST00000237186 Q6ZNX1 250 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 ZNF513Q8N8E2 541 aaPredicted RBP15.37■□□□□ 0.05
UBE3D-201ENST00000237186 SMYD1Q8NB12 490 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 OR52J3Q8NH60 311 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 FCGR1BQ92637 280 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms