RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 BEST4Q8NFU0 473 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 OR10T2Q8NGX3 314 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 MYLIPQ8WY64 445 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 MTERF1Q99551 399 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 TINAGL1Q9GZM7 467 aaPredicted RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 A0A096LPI6 279 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 GOSR2O14653 212 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ARHGEF15O94989 841 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 DIRAS1O95057 198 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 DCNP07585 359 aaKnown RBP10.71□□□□□ -0.69
MSH6-201ENST00000234420 RD3LP0DJH9 198 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 GLP1RP43220 463 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ZNF648Q5T619 568 aaPredicted RBP10.71□□□□□ -0.69
MSH6-201ENST00000234420 MFSD5Q6N075 450 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 TNFAIP8L2Q6P589 184 aaPredicted RBP10.71□□□□□ -0.69
MSH6-201ENST00000234420 ANKK1Q8NFD2 765 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 OR2AP1Q8NGE2 309 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 FBXW5Q969U6 566 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ACBD6Q9BR61 282 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 DNAJB4Q9UDY4 337 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 MDC1Q14676 2089 aaKnown RBP10.71□□□□□ -0.69
MSH6-201ENST00000234420 TEX13CA0A0J9YWL9 993 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ARL6IP5O75915 188 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 SERPINA7P05543 415 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 M6PRP20645 277 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 RELAQ04206 551 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 NPRL3Q12980 569 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 TMEM44Q2T9K0 475 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 GPR149Q86SP6 731 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ZDHHC1Q8WTX9 485 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 IPPKQ9H8X2 491 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 KCNJ16Q9NPI9 418 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 KCND1Q9NSA2 647 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ADGRL2O95490 1459 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 CNTRLQ7Z7A1 2325 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 A0A0G2JMP0 313 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 SOX1O00570 391 aaPredicted RBP10.71□□□□□ -0.69
MSH6-201ENST00000234420 RBBP9O75884 186 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 CLDN9O95484 217 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 MAPTP10636 758 aaKnown RBP10.71□□□□□ -0.69
MSH6-201ENST00000234420 ANXA8P13928 327 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 AKR1C4P17516 323 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 UGT2B10P36537 528 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 CLCQ05315 142 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 CAMK2DQ13557 499 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 PRAMEF13Q5VWM6 474 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 PLEKHG7Q6ZR37 379 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ASRGL1Q7L266 308 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 HMGN2P46Q86SG4 172 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 CLEC1AQ8NC01 280 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 OR4M2Q8NGB6 313 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 ECHDC3Q96DC8 303 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 PELOQ9BRX2 385 aaKnown RBP10.71□□□□□ -0.69
MSH6-201ENST00000234420 OR8D2Q9GZM6 311 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 NLKQ9UBE8 527 aa10.71□□□□□ -0.69
MSH6-201ENST00000234420 TLX2O43763 284 aaPredicted RBP10.71□□□□□ -0.7
MSH6-201ENST00000234420 PRKACGP22612 351 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 GSTM2P28161 218 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 MYBPHQ13203 477 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 HIST2H3PS2Q5TEC6 136 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 SMYD5Q6GMV2 418 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 MED27Q6P2C8 311 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 PAPOLGQ9BWT3 736 aaKnown RBP10.71□□□□□ -0.7
MSH6-201ENST00000234420 NTN4Q9HB63 628 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 ADCY10Q96PN6 1610 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 hCG_1818297A0A087WSY0 165 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 A0A1B0GVG6 124 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 MMP8P22894 467 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 CD6P30203 668 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 GNB2P62879 340 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 TUSC3Q13454 348 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 COTL1Q14019 142 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 CTU1Q7Z7A3 348 aaKnown RBP10.71□□□□□ -0.7
MSH6-201ENST00000234420 C12orf45Q8N5I9 185 aaPredicted RBP10.71□□□□□ -0.7
MSH6-201ENST00000234420 ZNF420Q8TAQ5 688 aaPredicted RBP10.71□□□□□ -0.7
MSH6-201ENST00000234420 COL21A1Q96P44 957 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.71□□□□□ -0.7
MSH6-201ENST00000234420 SERTAD4Q9NUC0 356 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 EBF1Q9UH73 591 aa10.71□□□□□ -0.7
MSH6-201ENST00000234420 H0Y8G0 127 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 UBFD1O14562 309 aaKnown RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 CYTIPO60759 359 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 TBX18O95935 607 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 MBP02144 154 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 CLEC3BP05452 202 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 FBLP22087 321 aaKnown RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 PLEKHN1Q494U1 663 aaPredicted RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 ELMOD3Q96FG2 381 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 TMEM80Q96HE8 168 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 ATG5Q9H1Y0 275 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 PLCXD1Q9NUJ7 323 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 RPH3ALQ9UNE2 315 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 FAM234BA2RU67 622 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 NRP1O14786 923 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 SLC19A2O60779 497 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 SOX14O95416 240 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 ARAFP10398 606 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 DSC2Q02487 901 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 LAPTM4AQ15012 233 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms