RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PURGQ9UJV8 347 aaKnown RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 FAM240BA0A1B0GVZ2 78 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 FAM74A7A6NL05 159 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 FAM170BA6NMN3 283 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 MATN4O95460 622 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 POP4O95707 220 aaKnown RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CD1DP15813 335 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CR2P20023 1033 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 PTAFRP25105 342 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CORO1AP31146 461 aaKnown RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CAPZA1P52907 286 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 FGL1Q08830 312 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 PROX2Q3B8N5 592 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 LGALSLQ3ZCW2 172 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 FAM74A3Q4VXF1 159 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 MZT2BQ6NZ67 158 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 SLC22A9Q8IVM8 553 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 ADGRG2Q8IZP9 1017 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 LRRC17Q8N6Y2 441 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 BTN2A2Q8WVV5 523 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 DPH7Q9BTV6 452 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 LRRC3Q9BY71 257 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 GPN3Q9UHW5 284 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 NDRG4Q9ULP0 352 aaKnown RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CMAHPQ9Y471 501 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 A0A1B0GWJ7 208 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 MPTX1A8MV57 137 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 UBFD1O14562 309 aaKnown RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 SEC22BO75396 215 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CLN5O75503 358 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CLDN11O75508 207 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 IFNA4P05014 189 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF806P0C7X5 589 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CASP2P42575 452 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 PREPP48147 710 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF140P52738 457 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 STC1P52823 247 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 RPS6KA2Q15349 733 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 AP5B1Q2VPB7 878 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 ENPP6Q6UWR7 440 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.04□□□□□ -0.322e-8■■□□□ 11.7
GABPB1-201ENST00000220429 FBXO30Q8TB52 745 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 PLD4Q96BZ4 506 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 RBCK1Q9BYM8 510 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 A0A0G2JPF8 293 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 A0A1B0GTQ1 180 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 FABP12A6NFH5 140 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 HNRNPCL3B7ZW38 293 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 WRBO00258 174 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 INSIG1O15503 277 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CHP2O43745 196 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 SELENOFO60613 162 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 RHOCP08134 193 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 H2AFB1P0C5Y9 115 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 H2AFB2P0C5Z0 115 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 SMIM6P0DI80 62 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 HNRNPCL4P0DMR1 293 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 HPGDP15428 266 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 OGNP20774 298 aaKnown RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 SUOXP51687 545 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 FCN2Q15485 313 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 NKG7Q16617 165 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF284Q2VY69 593 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 PYDC2Q56P42 97 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 PAGE3Q5JUK9 113 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF678Q5SXM1 525 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 EIF3MQ7L2H7 374 aaKnown RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 HIPK1Q86Z02 1210 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 PAPOLGQ9BWT3 736 aaKnown RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 BARHL1Q9BZE3 327 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CD244Q9BZW8 370 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CWH43Q9H720 699 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 NLE1Q9NVX2 485 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 MED9Q9NWA0 146 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 SLAMF8Q9P0V8 285 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 KLHL42Q9P2K6 505 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 UTS2RQ9UKP6 389 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 EFCAB7A8K855 629 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 TSPAN3O60637 253 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 WBP4O75554 376 aaKnown RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CXCL10P02778 98 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 IRF1P10914 325 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 TSPAN8P19075 237 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 EMX2Q04743 252 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 LRRC74AQ0VAA2 488 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 SLC16A13Q7RTY0 426 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 DEFB128Q7Z7B8 93 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 CYP4Z1Q86W10 505 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 MDGA1Q8NFP4 955 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 UBE2FQ969M7 185 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 L3HYPDHQ96EM0 354 aa13.04□□□□□ -0.32
GABPB1-201ENST00000220429 IGSF21Q96ID5 467 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms