RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TMEM41AQ96HV5 264 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 LMO7Q8WWI1 1683 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 IGKV6-21A0A0C4DH24 114 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 C2orf92A0A1B0GVN3 265 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 SPINT3P49223 89 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 NUDT6P53370 316 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 ARSFP54793 590 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 C6orf136Q5SQH8 315 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 FAM69BQ5VUD6 431 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 KCTD18Q6PI47 426 aaPredicted RBP18.2■□□□□ 0.5
SMPD3-201ENST00000219334 BIRC7Q96CA5 298 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 F2RL3Q96RI0 385 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 METTL8Q9H825 291 aaKnown RBP18.2■□□□□ 0.5
SMPD3-201ENST00000219334 MEAF6Q9HAF1 191 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 PSAT1Q9Y617 370 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 PPM1BO75688 479 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 SPARCP09486 303 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 ENTPD1P49961 510 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 ACY1Q03154 408 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 CARTPTQ16568 116 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 SPATS1Q496A3 300 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 RHEBL1Q8TAI7 183 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 SH3PXD2BA1X283 911 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PVALBP20472 110 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 S1PR1P21453 382 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 HMGCLP35914 325 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 RBM34P42696 430 aaKnown RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 DCDC1P59894 354 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 DSG2Q14126 1118 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PCLAFQ15004 111 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 FIGLAQ6QHK4 219 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 NXPE4Q6UWF7 544 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 TMEM121BQ9BXQ6 578 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 RHCGQ9UBD6 479 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 BHMG1C9JSJ3 638 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PDLIM1O00151 329 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PTGESO14684 152 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 CDC40O60508 579 aaKnown RBP eCLIP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 LILRB3O75022 631 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 CLPXO76031 633 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PDYNP01213 254 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 CD1DP15813 335 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 MVKQ03426 396 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 ECH1Q13011 328 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 NSDHLQ15738 373 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 RABL3Q5HYI8 236 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PROM1O43490 865 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 AK1P00568 194 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 MT-ND5P03915 603 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PROS1P07225 676 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 DRD2P14416 443 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PORP16435 677 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 SCAPQ12770 1279 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 UNC5DQ6UXZ4 953 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 TMEM40Q8WWA1 233 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 RORAP35398 523 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 PHOSPHO2Q8TCD6 241 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 FBRSL1Q9HCM7 1045 aaKnown RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 CCDC59Q9P031 241 aaKnown RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 LOC100130705A0A1B0GUX0 176 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 H3BSH0 61 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 ITGB1P05556 798 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 MSANTD1Q6ZTZ1 278 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 ASB18Q6ZVZ8 466 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 DIO2Q92813 273 aa18.19■□□□□ 0.5
SMPD3-201ENST00000219334 YTHDF1Q9BYJ9 559 aaKnown RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 ZBTB20Q9HC78 741 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-201ENST00000219334 MYOCOSA0A1B0GUC4 107 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 DCKP27707 260 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 ATP4BP51164 291 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 GPR143P51810 404 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 HERV-K104P61576 105 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 PSAPL1Q6NUJ1 521 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 CPEB1Q9BZB8 566 aaKnown RBP18.18■□□□□ 0.5
SMPD3-201ENST00000219334 TRPV4Q9HBA0 871 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 GIMAP2Q9UG22 337 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 BCAS2O75934 225 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-201ENST00000219334 GNG2P59768 71 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 FADDQ13158 208 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 ABHD17BQ5VST6 288 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 CWF19L1Q69YN2 538 aaKnown RBP18.18■□□□□ 0.5
SMPD3-201ENST00000219334 RPLP0P6Q8NHW5 317 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 CCDC115Q96NT0 180 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 ZNF395Q9H8N7 513 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-201ENST00000219334 SLC22A1O15245 554 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 CXCL12P48061 93 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 LRP8Q14114 963 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 SWT1Q5T5J6 900 aaKnown RBP18.18■□□□□ 0.5
SMPD3-201ENST00000219334 CRTC1Q6UUV9 634 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 PLEKHG7Q6ZR37 379 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 CARM1Q86X55 608 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 SLC44A3Q8N4M1 653 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 SHKBP1Q8TBC3 707 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 PCDH10Q9P2E7 1040 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 TMPRSS11EQ9UL52 423 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 SLC7A11Q9UPY5 501 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 C14orf166Q9Y224 244 aaKnown RBP18.18■□□□□ 0.5
SMPD3-201ENST00000219334 H2BFMP0C1H6 154 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 F8A1P23610 371 aa18.18■□□□□ 0.5
SMPD3-201ENST00000219334 CLLU1OSQ5K130 101 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms