RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SLC29A2Q14542 456 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 TERF2Q15554 542 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 OR4D1Q15615 310 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 ADPRMQ3LIE5 342 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 XKR6Q5GH73 641 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CEP85LQ5SZL2 805 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 C16orf47Q6ZP98 133 aaPredicted RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 GDF7Q7Z4P5 450 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 MDGA2Q7Z553 956 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF595Q8IYB9 648 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 TCAIMQ8N3R3 496 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 OR2L5Q8NG80 312 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 MTFMTQ96DP5 389 aaKnown RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CSF3RQ99062 836 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CCDC77Q9BR77 488 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CAPS2Q9BXY5 557 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CNOT10Q9H9A5 744 aaKnown RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF490Q9ULM2 529 aaPredicted RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 PPIEQ9UNP9 301 aaKnown RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 MRPS33Q9Y291 106 aaKnown RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 A0A1B0GTH9 108 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 PRRG2O14669 202 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 HS6ST1O60243 411 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 CDC40O60508 579 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■■■ 31.7
UPK3A-201ENST00000216211 STK16O75716 305 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 CD22P20273 847 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 GSTM2P28161 218 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 GMPRP36959 345 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 SSR4P51571 173 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 LIM2P55344 173 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 GPR85P60893 370 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 ILF2Q12905 390 aaKnown RBP13.96□□□□□ -0.17
UPK3A-201ENST00000216211 DOC2AQ14183 400 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 AGBL2Q5U5Z8 902 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 SULT1C3Q6IMI6 304 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 ABHD17CQ6PCB6 329 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 POGLUT1Q8NBL1 392 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 OR2W6PQ8NHA6 318 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 SREK1Q8WXA9 508 aaKnown RBP13.96□□□□□ -0.17
UPK3A-201ENST00000216211 CDKL2Q92772 493 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 EXT2Q93063 718 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 ARL8AQ96BM9 186 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 PTCD3Q96EY7 689 aaKnown RBP13.96□□□□□ -0.17
UPK3A-201ENST00000216211 TSPAN17Q96FV3 270 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 SEC16BQ96JE7 1060 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 F2RL3Q96RI0 385 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 SERINC2Q96SA4 455 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 GPR22Q99680 433 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 RBBP8Q99708 897 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 TRIM8Q9BZR9 551 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 ROPN1BQ9BZX4 212 aaPredicted RBP13.96□□□□□ -0.17
UPK3A-201ENST00000216211 PITHD1Q9GZP4 211 aaPredicted RBP13.96□□□□□ -0.17
UPK3A-201ENST00000216211 EHD1Q9H4M9 534 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 COPS7BQ9H9Q2 264 aaPredicted RBP13.96□□□□□ -0.17
UPK3A-201ENST00000216211 ROPN1Q9HAT0 212 aaPredicted RBP13.96□□□□□ -0.17
UPK3A-201ENST00000216211 ADAP2Q9NPF8 381 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 NINJ2Q9NZG7 142 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 CD274Q9NZQ7 290 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 KCMF1Q9P0J7 381 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 TXNDC16Q9P2K2 825 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 DAPP1Q9UN19 280 aa13.96□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF407Q9C0G0 2248 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 HCFC1P51610 2035 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 PHF3Q92576 2039 aaKnown RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 GOLGA6L10A6NI86 522 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 HMGB1P1B2RPK0 211 aaPredicted RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 CYR61O00622 381 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 ADAM10O14672 748 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 POLR3GO15318 223 aaPredicted RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 CCNT2O60583 730 aaKnown RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 ZFAND5O76080 213 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 SHBGP04278 402 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 IFNA16P05015 189 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 TPOP07202 933 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 ABHD2P08910 425 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 MYZAPP0CAP1 466 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 STMN1P16949 149 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 TFEBP19484 476 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 HPDP32754 393 aaPredicted RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 KIR3DL1P43629 444 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 MTTPP55157 894 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 ATP6V0D1P61421 351 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 IFFO1Q0D2I5 559 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 BMPR2Q13873 1038 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 PDK4Q16654 411 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 TTMPQ5BVD1 217 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 CDKL4Q5MAI5 379 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 PDPRQ8NCN5 879 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 PHF10Q8WUB8 498 aaKnown RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 ZBTB9Q96C00 473 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 WDR34Q96EX3 536 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 ATP6V1G3Q96LB4 118 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 DMRTA2Q96SC8 542 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 CPNE1Q99829 537 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 EFCAB11Q9BUY7 163 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 PRDM7Q9NQW5 492 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 PTBP2Q9UKA9 531 aaKnown RBP13.95□□□□□ -0.18
UPK3A-201ENST00000216211 RNF112Q9ULX5 631 aa13.95□□□□□ -0.18
UPK3A-201ENST00000216211 YARS2Q9Y2Z4 477 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms