RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 SmoxQ99K82 555 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 HypmQ9CR04 117 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rpl4Q9D8E6 419 aaKnown RBP7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Nmnat1Q9EPA7 285 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Plxna4Q80UG2 1893 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 TprnA2AI08 749 aaKnown RBP7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rhox13F6YCR7 232 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Dcdc2bF7BCK0 340 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Vmn2r75G5E8Z7 853 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Vmn2r10K7N621 847 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Prl8a2O54832 240 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 FiglaO55208 194 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Brd7O88665 651 aaKnown RBP7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Mtnd3P03899 115 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cd86P42082 309 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Fkbp14P59024 211 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gpr143P70259 405 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cct3P80318 545 aaKnown RBP7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gpr15Q0VDU3 360 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Slc2a9Q3T9X0 538 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gtpbp2Q3UJK4 602 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Tmub2Q3V209 319 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Brinp2Q6DFY8 783 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Doxl2Q6IMK7 723 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Bfsp2Q6NVD9 416 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Slitrk5Q810B7 957 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Insig1Q8BGI3 259 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Fam109aQ8BH49 266 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Ago1Q8CJG1 857 aaKnown RBP7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rnf219Q8K2Y0 722 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 PpcsQ8VDG5 311 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Olfr1324Q8VEU7 332 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Nrif2Q921B4 824 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 GhdcQ99J23 532 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cmtm3Q99LJ5 184 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Slc31a2Q9CPU9 143 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rnaseh2aQ9CWY8 301 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Ndufs3Q9DCT2 263 aaKnown RBP7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Tyk2Q9R117 1184 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rhox2dW4VSN9 191 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Arrdc4A0A0B4J1F4 415 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Xkr6E9Q6C8 638 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Agr2O88312 175 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cd93O89103 644 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Eif4ebp2P70445 120 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Apba2P98084 750 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Bpifa6Q0VGU8 367 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cldn34b4Q3V0X2 211 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rassf5Q5EBH1 413 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 PtprnQ60673 979 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Klf4Q60793 483 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Map3k3Q61084 626 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Stard3Q61542 446 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Fam189a1Q6A044 515 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Dtx4Q6PDK8 616 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Paqr3Q6TCG8 311 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Olfr1085Q7TR64 313 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Olfr664Q7TRP5 306 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gm21627Q810R0 219 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cdk5rap1Q8BTW8 588 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Fbxo48Q8CAT8 161 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Dppa4Q8CCG4 296 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Foxe1Q8R2I0 371 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Olfr77Q8VEY9 312 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Olfr308Q8VFP2 308 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Q91V76 315 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 SharpinQ91WA6 380 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Asb9Q91ZT8 290 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rassf1Q99MK9 340 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Kdelr2Q9CQM2 212 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Zdhhc21Q9D270 265 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 4933407L21RikQ9D476 131 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Hspb11Q9D6H2 143 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 2200002D01RikQ9D809 114 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rgs6Q9Z2H2 472 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Thsd7bQ6P4U0 1607 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Adh6bA0A1D5RMB0 384 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gm34653A0A1L1SR01 368 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Slfn3A0A1L1STQ7 640 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Tceal7A3KGA4 98 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Nipsnap3aB1AWZ3 247 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Mettl11bB2RXM4 283 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rnf165E9QAU8 347 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gm28048F7BCN0 99 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Stk16O88697 305 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Epb42P49222 691 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 GlaP51569 419 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gp1bbP56400 206 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gbx1P82976 418 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Adra1bP97717 514 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Znf800Q0VEE6 662 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Fubp3Q3TIX6 575 aaKnown RBP7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Q3TYS2 187 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rars2Q3U186 578 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Nkain3Q3URJ8 181 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cdk15Q3V3A1 433 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Prss53Q571E5 552 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 C2cd4cC2CD4Q5HZI2 419 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Spata48Q5NC83 441 aa7.95□□□□□ -1.14
Cdc40-201ENSMUST00000044166 OclnQ61146 521 aa7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms