RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ing3Q8VEK6 421 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 St3gal4Q91Y74 333 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Slc25a37Q920G8 338 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Oosp1Q925U0 202 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Lims1Q99JW4 325 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Senp8Q9D2Z4 221 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Cpne6Q9Z140 557 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Igkv4-86A0A0G2JGE7 114 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm13420A0A140LJJ2 248 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Rpl7a-ps3A0A140T8L1 270 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ndor1A2AI05 598 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 EXOC1LB9EK06 172 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm2956E9PVJ0 216 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Vmn2r56E9Q4U5 779 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Psmc3ipO35047 217 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Rpl3P27659 403 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ccnb2P30276 398 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Foxk1P42128 719 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Kcnj12P52187 427 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Rgs14P97492 547 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Sez6l2Q4V9Z5 910 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Prkg2Q61410 762 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 NovQ64299 354 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Nudcd1Q6PIP5 582 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 PrlhrQ6VMN6 370 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr591Q7TRR7 314 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Lpcat2Q8BYI6 544 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Wdr26Q8C6G8 641 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 RhdQ8CF94 418 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Thap1Q8CHW1 210 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Neto1Q8R4I7 533 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Tnfrsf12aQ9CR75 129 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Stx11Q9D3G5 287 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Mid2Q9QUS6 705 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Adam23Q9R1V7 829 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm5938A2AEN9 163 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr1306A2BFL7 312 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Cyp2d37-psF6YKB5 150 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 HgdO09173 445 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 P01667 111 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 CatP24270 527 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Nrg2P56974 756 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 March9Q3TZ87 348 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Secisbp2Q3U1C4 858 aaKnown RBP12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Xkr9Q5GH62 373 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Elavl3Q60900 367 aaKnown RBP12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Hist2h2acQ64523 129 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Hist2h2aa1Q6GSS7 130 aaKnown RBP12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Zmiz1Q6P1E1 1072 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr1344Q7TQV3 321 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ugt2b35Q8BJL9 529 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Derl2Q8BNI4 239 aaKnown RBP12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 E330021D16RikQ8BW45 371 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Npsr1Q8BZP8 371 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 GabrpQ8QZW7 440 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Fam20bQ8VCS3 409 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Rnf130Q8VEM1 419 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ergic3Q9CQE7 383 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 NarfQ9CYQ7 462 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 NtsQ9D3P9 169 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Tmprss6Q9DBI0 811 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Habp4Q9JKS5 411 aaKnown RBP12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr49Q9Z1V0 313 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Atp6ap1lD3Z5W0 336 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Vmn1r55E9Q8I6 310 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 EllO08856 602 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 RngttO55236 597 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Mup4P11590 178 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Abcb1aP21447 1276 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Igfbp2P47877 305 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gal3st3P61315 431 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Csnk2bP67871 215 aaKnown RBP12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ipcef1Q5DU31 406 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm11492Q5ND19 536 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Itih2Q61703 946 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Irf4Q64287 450 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Sall4Q8BX22 1067 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Rgs8Q8BXT1 180 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Cndp2Q9D1A2 475 aaKnown RBP12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Aar2Q9D2V5 384 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Slco2a1Q9EPT5 643 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Mrpl46Q9EQI8 283 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Sphk2Q9JIA7 617 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Fzd2Q9JIP6 570 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 DstnQ9R0P5 165 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 TesminQ9WTJ6 475 aa12.15□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm43796A0A0J9YV32 372 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Sult2a7A0A1B0GRF0 313 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Rhox2bA2A447 191 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Rhox2cA2AWL9 191 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Zcchc7B1AX39 541 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Gm7714E9Q079 131 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 A530032D15RikE9Q422 215 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Gm17615E9Q9P2 165 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Adrb1P34971 466 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Tmem165P52875 323 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Scrn3Q3TMH2 418 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Tbc1d24Q3UUG6 561 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Cxcl17Q5UW37 119 aa12.14□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Cdk6Q64261 326 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms