RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ULBP3Q9BZM4 244 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ACTL8Q9H568 366 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 MIEF1Q9NQG6 463 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 DLL3Q9NYJ7 618 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 PHF11Q9UIL8 331 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ASB4Q9Y574 426 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 B3GALT1Q9Y5Z6 326 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 CPNE3O75131 537 aaKnown RBP16.53■□□□□ 0.24
PHGDH-230ENST00000641927 PRPS1L1P21108 318 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 CPN2P22792 545 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 HPCAL1P37235 193 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 GSTM5P46439 218 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 GCGRP47871 477 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 SHC2P98077 582 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 KLC1Q07866 573 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 HEPACAMQ14CZ8 416 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 NDUFAF5Q5TEU4 345 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 MRM1Q6IN84 353 aaKnown RBP16.53■□□□□ 0.24
PHGDH-230ENST00000641927 IKBIPQ70UQ0 350 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 DSELQ8IZU8 1212 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 MMP21Q8N119 569 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 CA13Q8N1Q1 262 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 SLC38A9Q8NBW4 561 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 PROKR1Q8TCW9 393 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 NUDT8Q8WV74 236 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-230ENST00000641927 TAAR9Q96RI9 348 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 CCDC106Q9BWC9 280 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 FAIM2Q9BWQ8 316 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 NPLQ9BXD5 320 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ASPSCR1Q9BZE9 553 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ZNF304Q9HCX3 659 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ZIM2Q9NZV7 527 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 DAPP1Q9UN19 280 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 A0A1W2PNU3 283 aaPredicted RBP16.52■□□□□ 0.23
PHGDH-230ENST00000641927 A0A1W2PR48 441 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 ANKRD28O15084 1053 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 CHST10O43529 356 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 KIAA0754O94854 1291 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 COX7A2P14406 83 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 PCSK2P16519 638 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 ZNF28P17035 718 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 FBLP22087 321 aaKnown RBP16.52■□□□□ 0.23
PHGDH-230ENST00000641927 PIK3R1P27986 724 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 BUD31P41223 144 aaPredicted RBP16.52■□□□□ 0.23
PHGDH-230ENST00000641927 SYT16Q17RD7 645 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 ARHGAP40Q5TG30 622 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 TMEM164Q5U3C3 297 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 C18orf63Q68DL7 685 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 ANKRD26P1Q6NSI1 321 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 PRMT9Q6P2P2 845 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 FAM47BQ8NA70 645 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 FAM122AQ96E09 287 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 PEX11GQ96HA9 241 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 RBCK1Q9BYM8 510 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 LYRM4Q9HD34 91 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 MS4A12Q9NXJ0 267 aa16.52■□□□□ 0.23
PHGDH-230ENST00000641927 WBP11Q9Y2W2 641 aaKnown RBP16.52■□□□□ 0.23
PHGDH-230ENST00000641927 TMEM184BQ9Y519 407 aaPredicted RBP16.52■□□□□ 0.23
PHGDH-230ENST00000641927 CNOT1A5YKK6 2376 aaKnown RBP16.51■□□□□ 0.23
PHGDH-230ENST00000641927 GLOD5A6NK44 160 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 NR5A2O00482 541 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 PROM1O43490 865 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 PRKRAO75569 313 aaKnown RBP16.51■□□□□ 0.23
PHGDH-230ENST00000641927 AIFM1O95831 613 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 JAK1P23458 1154 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 ADSLP30566 484 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-230ENST00000641927 TLX1P31314 330 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-230ENST00000641927 POLR2JP52435 117 aaKnown RBP16.51■□□□□ 0.23
PHGDH-230ENST00000641927 CLNS1AP54105 237 aaKnown RBP16.51■□□□□ 0.23
PHGDH-230ENST00000641927 ABHD18Q0P651 414 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 PGS1Q32NB8 556 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 FAM71E1Q6IPT2 247 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 GK5Q6ZS86 529 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 SHISA5Q8N114 240 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 CACTIN-AS1Q8N1I8 211 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHGDH-230ENST00000641927 STARD8Q92502 1023 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 CSF3RQ99062 836 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 ZPBPQ9BS86 351 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 DDA1Q9BW61 102 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 REEP4Q9H6H4 257 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 WDR41Q9HAD4 459 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 KCMF1Q9P0J7 381 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 SH3BP4Q9P0V3 963 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 TRPC4Q9UBN4 977 aa16.51■□□□□ 0.23
PHGDH-230ENST00000641927 LOC100653049A0A140TA62 436 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 SCAMP2O15127 329 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 SLC22A2O15244 555 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 PRMT3O60678 531 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 KRT34O76011 436 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 TNFSF15O95150 251 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 NR2F6P10588 404 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 RNH1P13489 461 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 CD1EP15812 388 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 DDCP20711 480 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 IL12AP29459 219 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 MRPL19P49406 292 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 RAB38P57729 211 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms