RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 KANSL1Q7Z3B3 1105 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 GLRX5Q86SX6 157 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 GATAD2AQ86YP4 633 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 GALNT15Q8N3T1 639 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 AMER3Q8N944 861 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 FAM156AQ8NDB6 213 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 SRFBP1Q8NEF9 429 aaKnown RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 PPCDCQ96CD2 204 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 MTERF3Q96E29 417 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 CRELD1Q96HD1 420 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 KCNC2Q96PR1 638 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TRAPPC9Q96Q05 1148 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 INPP5KQ9BT40 448 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TBCDQ9BTW9 1192 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 BHLHE41Q9C0J9 482 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 PAIP1Q9H074 479 aaKnown RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 PRDM7Q9NQW5 492 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 NLGN3Q9NZ94 848 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 SH3BP4Q9P0V3 963 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 SUCOQ9UBS9 1254 aaKnown RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TP53BP1Q12888 1972 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 ASXL3Q9C0F0 2248 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 LOC105369274A0A096LPK9 316 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 LOC102723532A0A0G2JNH3 316 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SLC9B1P1A6NJY1 282 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 H0YGG7 62 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ATXN7O15265 892 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 YKT6O15498 198 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 P2RX6O15547 441 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 NUDT21O43809 227 aaKnown RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SCN2BO60939 215 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SLC35G6P0C7Q6 338 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 MYF5P13349 255 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ATP5A1P25705 553 aaKnown RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ALDH4A1P30038 563 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 TRPC1P48995 793 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 HNRNPFP52597 415 aaKnown RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 EEFSECP57772 596 aaKnown RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 OR1D5P58170 312 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 RAB8AP61006 207 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ARF3P61204 181 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 MS4A2Q01362 244 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 KLC1Q07866 573 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 CCNIQ14094 377 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SELPLGQ14242 412 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SPATS1Q496A3 300 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 GTDC1Q4AE62 458 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ZNF385BQ569K4 471 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 RUNDC3AQ59EK9 446 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 RABL3Q5HYI8 236 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 LRIF1Q5T3J3 769 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 NKAIN2Q5VXU1 208 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 FRMPD2BQ6IN97 320 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 FAM92BQ6ZTR7 304 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SLCO6A1Q86UG4 719 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 MSRB3Q8IXL7 192 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 OR4N4Q8N0Y3 316 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ZCCHC7Q8N3Z6 543 aaKnown RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 C19orf47Q8N9M1 422 aaKnown RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 KCT2Q8NC54 265 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 CAMKVQ8NCB2 501 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 OR8K5Q8NH50 307 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SAP25Q8TEE9 199 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 GAL3ST3Q96A11 431 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 RERGQ96A58 199 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 MIEF2Q96C03 454 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ANKRD27Q96NW4 1050 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 C1GALT1Q9NS00 363 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ATAD3AQ9NVI7 634 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 SLC25A37Q9NYZ2 338 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 VAPAQ9P0L0 249 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 GMPR2Q9P2T1 348 aaKnown RBP12.44□□□□□ -0.42
PHGDH-221ENST00000641573 BTNL2Q9UIR0 455 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 ZNF462Q96JM2 2506 aa12.44□□□□□ -0.42
PHGDH-221ENST00000641573 CABIN1Q9Y6J0 2220 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 TRBV5-3A0A0A0MS03 114 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 PRSS51A0A1B0GVH4 220 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 TRABD2BA6NFA1 517 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 RFXANKO14593 260 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 TBX19O60806 448 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 C1QL1O75973 258 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 ANP32DO95626 131 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 CPSF4O95639 269 aaKnown RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 GSNP06396 782 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 FAM58BPP0C7Q3 252 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 ZNF888P0CJ79 500 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 ALPPL2P10696 532 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 HSD17B1P14061 328 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 GLB1P16278 677 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 HOXB9P17482 250 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 DDCP20711 480 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 EFNA1P20827 205 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 HIST1H1TP22492 207 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 CDKN2CP42773 168 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms